Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02057 ATGGGAACTGATAGTTGTAAAGTGGTAGAGGCATTACCAGATCCCCGCTCTTTTAAGGTACATCGTAGACTCTGCACAGAACTCAAAAAATTAGTTGATAGGGTGTTAAGGATCTTTCCGCAGATAGAGGAAGCACGTCCTCGGTCCTCATCAGGAATACCGGCTCTGGTTTTGCTAACCAGTACAATTGATAAAGCCAAACAACTTCTGCAAAATTGCTCTGATTCTAGTGTACTTTACCTGGCAATAACAGGGGAGTCAATTCTCTCAAAATGCCAAAAGGCAAGAAAGTCATTAGAGAAAAGCTTAGTCCAGATTCAAGATATAGTTCCTGTTATGTTGGCTGCAGAGATTTCTCGAATAGTTGATGATCTTAGGCGTGTCACCTTTGTCCTGGATTCTGCTGAAGAAGAGGCTGGGAGGGTTATGAGAGAATTGCTCCAACAAGGTCCTTCAACCACAGATAACGATTCAAAGGAAAACTTAGACGTAAAATCTCTCCTGTTTGCAGCGGCCAGACTTAATATCACATCTGCAACAAGCATCGTAATAGAGAGAAGATCTATTAAGAAGTTACTACAAAAACTTGGACAAAATGAGGAAACGAAAAAGGTGATCTTGAAAAATCTGTTGTATCTTCTGATAAAGTATGGAAACTTATTAAACACGGGAGAACAAGAGGAGGTCTATTCTTATCGTGAAGAATCAGCAGCGAATGAGAACTCCAGTCATGATTCTTTACGCACCGATAGTGTGAATTCTGAGCTGTATTCAAAACACGATCAGTATGGAATTCGTGCCAGCGAGTTGATTAGAGTCGCACCTCCAGAGGAATATGCGTGCCCGATATCTTTAAGGTTGATGTATGATCCTGTTGTCATTGCTTCGGGAGAAACATACGAGCAGATGTGGATACAGAAATGGTTTGATGAGGGTAATGTTATATGCCCGAAAACTAAAAAGAAACTGCCGCATTTGGCGATGACTCCGAACGTTGCTTTAAAGGAATTAATATCAAAGTGGTGCAAAACTAATGACGTCTCCATTCCTAATCCAAGTAGGCAAGCGGAAGACATTCGCTCATGGGAAGCTTCAGTCACTTCCATTAGGAGTTTCGGAAGTTCCATGAATGGTTTGAACGTGCCAATGGATCTTAGTAACGTATCATTTGGATCGGTAGATAACAGTTATAATTCAGATTCCTCACTTGTGAAGGCTAGTCGTGGCTTAAATTCGATGTTGATCAAGACTAGAAACAGTTCTCGCGGGCATCAATCTCGTTCACAGATACATGGCTCATATCTGGCGTCCTTGTCTGAACTTCATGAGCGTCAATGGGATTCACAGTGCCAAGTAGTCAAAGATATGAAAATAGATTTCAAATGCAATTCCGAAGCTTTTAACTCTGTGTCACCGGATAATTTCATTGACCCAGTTATGAGATTTCTGAGCACTGCATATGATAAGCATGACACAAAAGCTCTGCGAGGTGGATGTCAATTACTGTTGGAATTTACAAAGTACTGCAGAAATGGTGTGACAAACTTAAGTGAAGATACATGCAGTGTGTTGGCAAGTCTGCTCGAGACTGAAGTGATTGGAGAAGCTCTTGCTATACTGGAAGAATTGTCGAACCATTGGTCCGATAAAGCGAACATTGCAGCTTCCAATGCACTGACTTCTATTTTAAAGATCCTTGATTCTGGTAACCAAGAGTACCAACGGAAAGCTATTAGAATAATGTGCAACTTTTCAACCAATTCTGAATTTTGTTCGTACATCACGTCTCTCGGGTGCATCCCAAAATTACTACCATTTTTCGAAGACAAGTCCCTTTCAAGAGACTGTATATGCATATTGAAAAACCTTTGTGATACTAAAGACGGTAGGGTATCTGTTGTTGAAACTAAGGGATGCATGTCTTGTGTTGTTGAAATACTTGGGTCCAGTACAGACGAAGAAAAGGAATTTGCACTGGCGATTGTACTCTCTTTGTGCTCTCAACGCGTGGAATATTGTGAGTTGGTTATGGAGGAGGGTATTATACCGTATCTTGTCAATATCTCCAATATGGGAAACGATAGCACAAAGGTGTATGCGTTGGAACTGCTCCGACTTTTAAGGGATGTTGAGAGTGAAGGTTGCTTTGAGCAGAATGTTGACAAATCTAGAGATTCCAACGATCAATATGAAGAAAAGAAATCGTCAAAGAAATCCACATTTTTGAATAAGCTATCACGGTTTGGAAAATCAAGTTCAATTTCATCAAAAAACAAGAGATAA 2283 0.4047 MGTDSCKVVEALPDPRSFKVHRRLCTELKKLVDRVLRIFPQIEEARPRSSSGIPALVLLTSTIDKAKQLLQNCSDSSVLYLAITGESILSKCQKARKSLEKSLVQIQDIVPVMLAAEISRIVDDLRRVTFVLDSAEEEAGRVMRELLQQGPSTTDNDSKENLDVKSLLFAAARLNITSATSIVIERRSIKKLLQKLGQNEETKKVILKNLLYLLIKYGNLLNTGEQEEVYSYREESAANENSSHDSLRTDSVNSELYSKHDQYGIRASELIRVAPPEEYACPISLRLMYDPVVIASGETYEQMWIQKWFDEGNVICPKTKKKLPHLAMTPNVALKELISKWCKTNDVSIPNPSRQAEDIRSWEASVTSIRSFGSSMNGLNVPMDLSNVSFGSVDNSYNSDSSLVKASRGLNSMLIKTRNSSRGHQSRSQIHGSYLASLSELHERQWDSQCQVVKDMKIDFKCNSEAFNSVSPDNFIDPVMRFLSTAYDKHDTKALRGGCQLLLEFTKYCRNGVTNLSEDTCSVLASLLETEVIGEALAILEELSNHWSDKANIAASNALTSILKILDSGNQEYQRKAIRIMCNFSTNSEFCSYITSLGCIPKLLPFFEDKSLSRDCICILKNLCDTKDGRVSVVETKGCMSCVVEILGSSTDEEKEFALAIVLSLCSQRVEYCELVMEEGIIPYLVNISNMGNDSTKVYALELLRLLRDVESEGCFEQNVDKSRDSNDQYEEKKSSKKSTFLNKLSRFGKSSSISSKNKR 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02057 760 CDD RING-Ubox_PUB 276 326 IPR045210 -
Mepo1g02057 760 MobiDBLite consensus disorder prediction 719 760 - -
Mepo1g02057 760 MobiDBLite consensus disorder prediction 719 739 - -
Mepo1g02057 760 Pfam U-box domain 276 345 IPR003613 GO:0004842|GO:0016567
Mepo1g02057 760 Gene3D - 463 722 IPR011989 -
Mepo1g02057 760 PANTHER U BOX DOMAIN-CONTAINING 22 711 - -
Mepo1g02057 760 ProSiteProfiles U-box domain profile. 274 348 IPR003613 GO:0004842|GO:0016567
Mepo1g02057 760 SUPERFAMILY ARM repeat 529 727 IPR016024 -
Mepo1g02057 760 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 274 349 IPR013083 -
Mepo1g02057 760 SUPERFAMILY RING/U-box 267 351 - -
Mepo1g02057 760 SMART Ubox_2 278 341 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02057 Mepo-Chr1 21198845 21204812 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02057 15 720 U-box Gene Family AT4G36550 38.633 1.41e-140 429
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02057 - - gmx:100798951 948.347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g02057 1 21198845 21204812 Mepo1g02057 1 21198845 21204812 ECH
Mepo1g02057 1 21198845 21204812 Mepo5g00901 5 8819225 8824150 ECH
Mepo5g00901 5 8819225 8824150 Mepo1g02057 1 21198845 21204812 PCT