Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02024 ATGCCACACAGCAACAGTCCGGATAATTCCTCGCCCGATAACGCTACACCTGACGACGCTGATGGATCAGATTCTAGAAATTCATCTCCTTCCGGAGGAGGGAGCAATCCACCTCCTTCCGATGGAGGGAGCAATCCACCTCCTTCCGATGGAGGGAACGGTTCACCTCCTTCTGAAGGAGGAAACGGTTCACCTCCTTCTGGAGGAGGGAACATTTCGCCTCCTTCAGGAGGAGGGAACAATCCAGCCCCTTCAGGAGGAGGAAACAATTCACCTTTAGGAGGAGGGAACAATCCAGCCCCTTCAGGAGGAGGAGGGAACAATCCAGTCCCTTCAGGAGGAGGGAACAATCCAACCCCTTCAGGAGGAGGGAACAATTCACCATCTAGAGGAGGGAACGATTCTCCTTCATCGCAAAAACCAGGTTCAGGAGGAGGGAACAATTCCCCTTCTGTAGGAGAGAACAATTCTTCTGAATCAAATAGTACAAATAAGGAGGGTAATAGTAATGTACTAGTTGGAGTTATTGTTGGAGCAACTGTCCTTCTTTTAGTCGTTGGTGTTTGTCTCATTTGTTCGAGGAGAAAGAAGAGAAAGCAACCTTATTATTATGGTCCTCCAGATCCTTCACTTGCAAAAGGGAACAATTATTACAACAGTGGACAACATCCTCCTCCTCATCCAAATTGGCAAGGACCTCCATCAGGTCCACATGGAATGGACCATGTTGTTAGAGTCCAACAAAACCCTAATGGAGGAAGTGGTGTTTGGGGTGCACCACACCCTCTAATGAATAGTGGTGAGATGAGTTCTAATTACTCCTATGGAATGGGACCACCAGGTTCTATGCAATCTTCTCCAGGACTATCTCTTACTCTCAAGGGTGGTACATTCACTTATGAAGAATTGGCATCTGCTACTAAAGGTTTTGCTAATGAGAATATTATAGGACAAGGAGGTTTTGGTTATGTACATAAGGGAATTTTGCCTACTGGAAAGGAAATTGCTGTTAAAAGTTTAAAAGCGGGTAGCGGACAAGGCGAACGTGAGTTTCAAGCTGAGATTGATATCATTAGTCGTGTTCATCATCGTCATCTTGTGTCGCTTGTTGGATATTGTGTTTGTGGTGGACAAAGAATGTTGGTTTATGAATTTGTTCCAAATAAAACTTTGGAATATCACCTTCATGGAAAGGGTGTGCCTACTATGGATTGGCCTACTAGAATGAGAATTGCACTAGGATCTGCTAGAGGACTTGCTTACCTTCATGAAGATTGTAGTCCTCGTATTATCCACCGTGATATTAAGGCTGCTAATGTTCTAATTGATGATAGCTTCGAAGCTAAGGTGGCTGATTTTGGATTGGCTAAGTTGACTACCGATACTAATACACACGTCTCAACTCGTGTCATGGGAACATTCGGGTATATGGCCCCAGAATATGCATCAAGTGGAAAATTGACAGAGAAATCTGATGTTTTCTCATTTGGGGTTATGCTACTAGAACTCTTGACTGGAAAAAGACCTTTGGATTTAACCAATGCCATGGACGAAAGTTTAGTTGACTGGGCTCGACCACTTTTGAGTCATGCATTGGAGGAGGATGGAAACTTTGCAGAATTGGTGGATCCATTTTTGGAAGGAAATTACGATCATCAAGAAATGATAAGATTGGCAGCTTGTGCTGCTAGTAGCATTCGTCATTCTGCTAAAAAGCGTTCAAAAATGAGTCAGATAGTAAGGGCATTAGAAGGAGATGTATCACTAGAAGACTTGAAGGAAAGCATGATAAAAACTCCACCGCAAACCAATATTTATACCTCATCAGGCTCAGAATATGATACAATGCAATACAATGCAGATATGGCAAAGTTCAGAAAACAAATAATGTCAAATCAAGAACTTGATAGCGGTGAACACTAG 1923 0.4321 MPHSNSPDNSSPDNATPDDADGSDSRNSSPSGGGSNPPPSDGGSNPPPSDGGNGSPPSEGGNGSPPSGGGNISPPSGGGNNPAPSGGGNNSPLGGGNNPAPSGGGGNNPVPSGGGNNPTPSGGGNNSPSRGGNDSPSSQKPGSGGGNNSPSVGENNSSESNSTNKEGNSNVLVGVIVGATVLLLVVGVCLICSRRKKRKQPYYYGPPDPSLAKGNNYYNSGQHPPPHPNWQGPPSGPHGMDHVVRVQQNPNGGSGVWGAPHPLMNSGEMSSNYSYGMGPPGSMQSSPGLSLTLKGGTFTYEELASATKGFANENIIGQGGFGYVHKGILPTGKEIAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCVCGGQRMLVYEFVPNKTLEYHLHGKGVPTMDWPTRMRIALGSARGLAYLHEDCSPRIIHRDIKAANVLIDDSFEAKVADFGLAKLTTDTNTHVSTRVMGTFGYMAPEYASSGKLTEKSDVFSFGVMLLELLTGKRPLDLTNAMDESLVDWARPLLSHALEEDGNFAELVDPFLEGNYDHQEMIRLAACAASSIRHSAKKRSKMSQIVRALEGDVSLEDLKESMIKTPPQTNIYTSSGSEYDTMQYNADMAKFRKQIMSNQELDSGEH 640
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02024 640 MobiDBLite consensus disorder prediction 199 236 - -
Mepo1g02024 640 Pfam Protein tyrosine and serine/threonine kinase 313 512 IPR001245 GO:0004672|GO:0006468
Mepo1g02024 640 SUPERFAMILY Protein kinase-like (PK-like) 285 583 IPR011009 -
Mepo1g02024 640 FunFam Proline-rich receptor-like protein kinase PERK1 386 594 - -
Mepo1g02024 640 ProSiteProfiles Protein kinase domain profile. 310 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02024 640 MobiDBLite consensus disorder prediction 1 39 - -
Mepo1g02024 640 MobiDBLite consensus disorder prediction 1 167 - -
Mepo1g02024 640 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 179 628 IPR047117 -
Mepo1g02024 640 Gene3D Transferase(Phosphotransferase) domain 1 386 599 - -
Mepo1g02024 640 Gene3D Phosphorylase Kinase; domain 1 284 385 - -
Mepo1g02024 640 SMART serkin_6 310 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02024 640 ProSitePatterns Serine/Threonine protein kinases active-site signature. 430 442 IPR008271 GO:0004672|GO:0006468
Mepo1g02024 640 MobiDBLite consensus disorder prediction 55 167 - -
Mepo1g02024 640 FunFam proline-rich receptor-like protein kinase PERK1 288 385 - -
Mepo1g02024 640 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02024 Mepo-Chr1 20846567 20851950 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02024 170 627 Trihelix Transcription Factor Family AT1G70460 49.569 9.65e-144 432
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Mepo1g02024 PK_Tyr_Ser-Thr 3.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02024 - - gmx:100805872 691.804