LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Mepo1g02019	ATGGGGACTAAGGAGGATAGCACAACTAAACCTTCTAAAACATCTTCATCAACTCAGGAAGTACCAACACCAACAGTACAACCATCATATCCAGATTGGTCAACCTCCATGCAGGCCTACTATAATCCTGGAGCCGCTCCGCCTCCCTATTATGCCTCAACTGTTGCTTCACCAACCCCGCATCCTTATATGTGGGGAGGCCAGCATCCTATGATGGCGCCATACGGGACTCCAGTTCCGTATCCTGCAATGTACCCTCCTGGGAATATCTATGCTCATCCTAGCATGGTAGTGACTCCAAGTGCTATGCACCAAACTACAGAGTTTGAAGGGAAGGGACCTGATGTAAAGGATAAGGATTCATCTAAAAAACCGAAGGGCACTTCTGCAAATACAAGTGCCAAAGCAGGAGAGAGTGGAAAGGCAGGATCAGGTTCAGGCAATGATGGCTTTTCACATAGTGGTGACAGTGGTTCAGAGGGTTCATCTAATGCTAGCGATGAAAACCAACAGGAATCAGCTAGAAACAAGAAGGGAAGCTTTGACCTCATGCTTGTTGATGGAGCCAACGCGCAGAACAATACTACTGGACCCATTTCTCAATCATCTGTTCCTGGAAATCCAGTTGTCTCGATGCCTGCAACGAATCTTAATATTGGAATGGACTTATGGAATGCATCTTCTGCTGGTGCTGAAGCCGCCAAAATGAGACACAATCAACCTGGTGTCCCTGGAGCTGGTGCACTTGGCGAACAATGGATGCAACAAGATGATCGTGAGTTGAAAAGACAGAAGAGGAAACAGTCTAATCGAGAGTCAGCTAGGAGGTCAAGACTACGCAAGCAGGCTGAGTGTGAAGAGCTACAAAAGAGGGTGGAGGCGCTGGGAGGTGAGAATCGAACTCTCAGAGAAGAGCTTCAGAAACTTTCTGAAGAGTGTGAGAAGCTTACATCTGAAAACGATTCTATTAAGGAAGAGTTGGAACGGTTGTGTGGGCCTGAAGTAGTTGCTAACCTTGAATGA	1023	0.4692	MGTKEDSTTKPSKTSSSTQEVPTPTVQPSYPDWSTSMQAYYNPGAAPPPYYASTVASPTPHPYMWGGQHPMMAPYGTPVPYPAMYPPGNIYAHPSMVVTPSAMHQTTEFEGKGPDVKDKDSSKKPKGTSANTSAKAGESGKAGSGSGNDGFSHSGDSGSEGSSNASDENQQESARNKKGSFDLMLVDGANAQNNTTGPISQSSVPGNPVVSMPATNLNIGMDLWNASSAGAEAAKMRHNQPGVPGAGALGEQWMQQDDRELKRQKRKQSNRESARRSRLRKQAECEELQKRVEALGGENRTLREELQKLSEECEKLTSENDSIKEELERLCGPEVVANLE	340

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Mepo1g02019	340	Coils	Coil	271	326	-	-
	Mepo1g02019	340	SUPERFAMILY	Leucine zipper domain	261	317	IPR046347	GO:0003700\|GO:0006355
	Mepo1g02019	340	MobiDBLite	consensus disorder prediction	187	214	-	-
	Mepo1g02019	340	MobiDBLite	consensus disorder prediction	230	283	-	-
	Mepo1g02019	340	MobiDBLite	consensus disorder prediction	106	214	-	-
	Mepo1g02019	340	PANTHER	G-BOX-BINDING FACTOR 3-RELATED	1	335	IPR044827	GO:0003700\|GO:0006355\|GO:0043565
	Mepo1g02019	340	MobiDBLite	consensus disorder prediction	126	170	-	-
	Mepo1g02019	340	Pfam	bZIP transcription factor	259	320	IPR004827	GO:0003700\|GO:0006355
	Mepo1g02019	340	SMART	brlzneu	258	322	IPR004827	GO:0003700\|GO:0006355
	Mepo1g02019	340	CDD	bZIP_plant_GBF1	263	313	IPR045314	GO:0003700\|GO:0006355
	Mepo1g02019	340	MobiDBLite	consensus disorder prediction	1	31	-	-
	Mepo1g02019	340	FunFam	BZIP transcription factor	260	311	-	-
	Mepo1g02019	340	Gene3D	-	261	315	-	-
	Mepo1g02019	340	Pfam	G-box binding protein MFMR	1	96	IPR012900	-
	Mepo1g02019	340	ProSitePatterns	Basic-leucine zipper (bZIP) domain signature.	265	280	IPR004827	GO:0003700\|GO:0006355
	Mepo1g02019	340	MobiDBLite	consensus disorder prediction	110	125	-	-
	Mepo1g02019	340	ProSiteProfiles	Basic-leucine zipper (bZIP) domain profile.	260	323	IPR004827	GO:0003700\|GO:0006355

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Mepo1g02019	1	340	bZIP Transcription Factor Family	AT4G36730	54.386	6.13e-107	313

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	bZIP	Mepo1g02019		MFMR	7.1e-31	No_clan

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Mepo1g02019	K09060		-	gmx:778191	501.901

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Mepo1g02019	1	20776059	20780770	Mepo1g02019	1	20776059	20780770	ECH