Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g02002 ATGATCATGAAAGCTACAATGAACCTTAATGAAATGTGTAAGATAGGGAAATCAGTGTACAAAGCTAAAATAGATGGATTGGTTTTGGCTGTGAAAAATGTAAAGGGACATATCACAGTCACAGAAGAGTTGATGATTTTACAAAAGGTAAATCATGCAAATCTAGTGAAACTAATAGGTGTGTCTTCAGGATATGATGGAAATCACTTTCTTGTATATGAATATGCTGAAAATGGATCTCTTTATAACTGGTTGCTATCTGAGTTTTGCACTCTTAGTTGGAGTCAGAGGTTAAGCATAGCAGTTGATATTGCAATAGGGCTGCAATACTTGCATGAACACACACAACCATGTATAGTCCATAGGAACATCAAATCAAGTAACATTCTTCTTGACTCAAAATTTAAGGCCAAGATAGCAAATTTTTCTGTTGCAAGAACTACAAAGAATCCTATGATAACAAAAGTTGATGTTTTAGGTTATGGAATGGTTCTGATGGAGTTAATAACAGGAAAGAAGTTTTTGTCGTATAGCGAACATAGCGAGGTGAATATGTTGTGGAAAGATATTAAGTGTGTGTTTGATATAGAAGAAAAGAGAGAAGAAAGTGTTAGAAGATGGATGGATCCTAAGTTAGGGAGGTTTTATAATGTTGTTGAAGCTCTTAGTTTATTCACTTTAGCAGTGAATTGCATAAAAGAACAACCTTTGTTAAGACCAACTATGGGAGAAGTTGTTCTTAGTCTTTCTCTTCTCACTCAACACTCTCTTACTTTGTTAGAGAGGTCTTGGACATATGGATCAGACGTAGAGGTTTCTGAAATGGTTACTCCCATCATAGCTCGTTGA 849 0.3522 MIMKATMNLNEMCKIGKSVYKAKIDGLVLAVKNVKGHITVTEELMILQKVNHANLVKLIGVSSGYDGNHFLVYEYAENGSLYNWLLSEFCTLSWSQRLSIAVDIAIGLQYLHEHTQPCIVHRNIKSSNILLDSKFKAKIANFSVARTTKNPMITKVDVLGYGMVLMELITGKKFLSYSEHSEVNMLWKDIKCVFDIEEKREESVRRWMDPKLGRFYNVVEALSLFTLAVNCIKEQPLLRPTMGEVVLSLSLLTQHSLTLLERSWTYGSDVEVSEMVTPIIAR 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g02002 282 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 2 257 - -
Mepo1g02002 282 SUPERFAMILY Protein kinase-like (PK-like) 18 249 IPR011009 -
Mepo1g02002 282 Pfam Protein tyrosine and serine/threonine kinase 37 173 IPR001245 GO:0004672|GO:0006468
Mepo1g02002 282 ProSiteProfiles Protein kinase domain profile. 1 258 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g02002 282 PIRSF ILK 2 152 - -
Mepo1g02002 282 PIRSF ILK 147 269 - -
Mepo1g02002 282 Gene3D Transferase(Phosphotransferase) domain 1 152 263 - -
Mepo1g02002 282 Gene3D Transferase(Phosphotransferase) domain 1 76 151 - -
Mepo1g02002 282 Gene3D Phosphorylase Kinase; domain 1 1 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g02002 Mepo-Chr1 20587066 20587914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g02002 2 257 Receptor kinase-like Gene Family AT2G33580 35.889 5.72e-47 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Mepo1g02002 PK_Tyr_Ser-Thr 2.3e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g02002 - - gmx:100301877 325.865