Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01999 ATGGGAATAGCAACAACACCATCATCACTTCCTTCAACTTTCTCAAATTCATCAAGCACACAAAATTATCATAGTTCTTTTAATTCAATCTTAGAAAAGTCTCAAAACTTAACCAATTCTATGTCCCAAGATTATCATCACCACCACCAACAAGGAATCTTCACCTTCTCGAACGGATTCGAGAGATCGAACACTCCAGAAAACAACAATCCACACCAACAACAACAACAAATTCAAAGAGACAAAGTGAGAATTCAAGACTTCGATTCACAACAACCACCACAACCACCGCCGCCACCACTAATAGGCAACATAGAAGAAGAACAAGAAGCTCTACCGGTTTACGAAACAACCGGAATGTTGTCTGAGATGTTCAATTTCCCTCACGGCGCCTCGGCAGCCGAATTATTAGAACAGCAGCAGCAGCAACAACAACAAATGACATCAACAAGAACACCACAAGCAACACATGGAATAGGCAATTCCAGTGACTGGTACGGAAACAGACAAACGATGTTAACAGATTCAAAAAATCATCATAATAATCGTGACAGTAGTAGCAGCAGCAGCATATTTCATCATCAAAATCATCATCAGATGTCAAACATTAATGCTGAGTCAGCAGCTGCCATGCAGCTTTTTCTCATGAACCCGCAAACCACCAGATCCCCATCACCTCCACCTCAACCTCAACCTCATCCTTCATCTACTAATTCTTCCACTCTCCACATGTTACTTCCCAATCCTTCAACTACTAATCTCCAAGGTTATAATTCCGGAGCTGGAGGGTCTTTTGGTCAATTCACATGGTCTCAAGAAGGAGGAGGAGGAGCAACATCAAGTCATCACCAACTCAACAACAACCAACCAGAAATGGCAAGTGTTGTTGAAGGACAAGGTCTTTCGTTGTCGTTATCGACTTCCTTACAACATCATCATTCAGAGGATTTAAGAATGGGAGATGCTGCTGCTGGTGGTTTTCTATATTACAATCAAGGAGGACCAGGAACTTCTTACAAGAATCTTGGTAGTGTTCATCATCATCATTTACAAGGAGGTGGATTAGGACAAATTAATCATATTCATCAAGGACATGTTGGATTTGGTTCATCATCTTCTTCTTCTTTAGGTGTTGTTAATGTGTTGAGAAATTCAAAATATGTTAAAGCTGCTCAAGAATTGTTGGAAGAGTTTTGTAGTGTTGGAAGGGGTCAATTCAAGAAGAATAAATTTAGTAGACAATTATCAAACCCTAATTCAAATCAAGGTGGTGGTGGTGGTAGTGTTGGTGGTGGTGGTGCTTCTTCATCTTCATCAAAAGATGTTTCACCTTTGTCACCAGCTGATAGGATTGAGCATCAAAGAAGGAAGGTCAAACTTCTAACCATGCTTGACGAGGTGGATAGAAGATACAGTCATTACTGTGAACAAATGCAAATGGTGGTGAACTCATTTGACCTAGTAATGGGATTTGGTGCAGCAGTTCCATACACGGCACTAGCTCAGAAAGCAATGTCACGCCATTTTCGTTGTTTAAAGGATGCAATAACAGCACAGTTGAAACATAGTTGTGAGTTATTAGGAGAGAAAGATGGTGTGGGGACCTCAGGTTTGACCAAAGGAGAGACACCAAGACTTAAACTTCTTGAACAAAGCTTAAGACAGCAGAGAGCGTTTCATCAGATGGGGATGATGGAACAAGAAGCTTGGAGACCACAGAGAGGTTTGCCTGAACGATCTGTCAACATTTTGAGAGCCTGGCTTTTTGAACATTTTCTTCATCCGTACCCGAGTGATGCAGATAAGCATCTCTTAGCAAGACAGACTGGCCTTTCCAGAAATCAGGTATCAAACTGGTTCATTAATGCTAGGGTTCGTTTGTGGAAACCCATGGTAGAAGATATGTACCAACAAGAACTTAAAGAAGCAGAAGGATCATCAGAAGGAGATCAAGAAGATAGAGAAAACAAGAATCCTCAAAGCAGTACTAGCAACAACAACAACACAAGTGGTCACATATCTACTACTACTACAAATATTATTGCACAAACTCCAACACAACCTTCAACAACAACAACATCTACAACAACACCACAACCTACAAGTAACAACAATCAGCTGATGAGATCCAACAATACTATCAATGCCAATGAAAACGACCCATCACTTACACCATTAATAAATAGACAAGGCTTCTCGGAAAACCAAGCAATGTTGTTGCAACAACCATCTTCCACCGTTAAAACCACCGTCTCTGAGGTGGCACCACCTATCTCCGATTCAATGGCTATTGATGACACTTGTCGACATGGCAGCTTTGTTTCAGCGGAATATGGGACCACTGGTACCTCTGCTGACATTGGTTCTACACTCATCAGATTTGGGACCAATACTTCTGGTGACGTGTCACTCACTTTAGGGCTACGTCATGCCGGAAATTTGCCTGAGAAAACACCTTTCTCTCTTACAGACTTTGGAGGCATTTAA 2487 0.4129 MGIATTPSSLPSTFSNSSSTQNYHSSFNSILEKSQNLTNSMSQDYHHHHQQGIFTFSNGFERSNTPENNNPHQQQQQIQRDKVRIQDFDSQQPPQPPPPPLIGNIEEEQEALPVYETTGMLSEMFNFPHGASAAELLEQQQQQQQQMTSTRTPQATHGIGNSSDWYGNRQTMLTDSKNHHNNRDSSSSSSIFHHQNHHQMSNINAESAAAMQLFLMNPQTTRSPSPPPQPQPHPSSTNSSTLHMLLPNPSTTNLQGYNSGAGGSFGQFTWSQEGGGGATSSHHQLNNNQPEMASVVEGQGLSLSLSTSLQHHHSEDLRMGDAAAGGFLYYNQGGPGTSYKNLGSVHHHHLQGGGLGQINHIHQGHVGFGSSSSSSLGVVNVLRNSKYVKAAQELLEEFCSVGRGQFKKNKFSRQLSNPNSNQGGGGGSVGGGGASSSSSKDVSPLSPADRIEHQRRKVKLLTMLDEVDRRYSHYCEQMQMVVNSFDLVMGFGAAVPYTALAQKAMSRHFRCLKDAITAQLKHSCELLGEKDGVGTSGLTKGETPRLKLLEQSLRQQRAFHQMGMMEQEAWRPQRGLPERSVNILRAWLFEHFLHPYPSDADKHLLARQTGLSRNQVSNWFINARVRLWKPMVEDMYQQELKEAEGSSEGDQEDRENKNPQSSTSNNNNTSGHISTTTTNIIAQTPTQPSTTTTSTTTPQPTSNNNQLMRSNNTINANENDPSLTPLINRQGFSENQAMLLQQPSSTVKTTVSEVAPPISDSMAIDDTCRHGSFVSAEYGTTGTSADIGSTLIRFGTNTSGDVSLTLGLRHAGNLPEKTPFSLTDFGGI 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01999 828 MobiDBLite consensus disorder prediction 137 175 - -
Mepo1g01999 828 SMART HOX_1 570 634 IPR001356 GO:0003677
Mepo1g01999 828 MobiDBLite consensus disorder prediction 412 451 - -
Mepo1g01999 828 MobiDBLite consensus disorder prediction 640 725 - -
Mepo1g01999 828 MobiDBLite consensus disorder prediction 137 197 - -
Mepo1g01999 828 SMART prehox3 376 518 IPR006563 -
Mepo1g01999 828 Pfam Homeobox KN domain 587 626 IPR008422 GO:0003677|GO:0006355
Mepo1g01999 828 SUPERFAMILY Homeodomain-like 572 637 IPR009057 -
Mepo1g01999 828 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 227 656 - -
Mepo1g01999 828 MobiDBLite consensus disorder prediction 658 725 - -
Mepo1g01999 828 ProSiteProfiles 'Homeobox' domain profile. 567 630 IPR001356 GO:0003677
Mepo1g01999 828 FunFam BEL1-like homeodomain protein 4 573 635 - -
Mepo1g01999 828 MobiDBLite consensus disorder prediction 640 657 - -
Mepo1g01999 828 Gene3D - 573 635 - -
Mepo1g01999 828 MobiDBLite consensus disorder prediction 57 104 - -
Mepo1g01999 828 Pfam Associated with HOX 381 517 IPR006563 -
Mepo1g01999 828 MobiDBLite consensus disorder prediction 218 243 - -
Mepo1g01999 828 CDD homeodomain 570 631 IPR001356 GO:0003677
Mepo1g01999 828 MobiDBLite consensus disorder prediction 57 81 - -
Mepo1g01999 828 MobiDBLite consensus disorder prediction 1 23 - -
Mepo1g01999 828 MobiDBLite consensus disorder prediction 183 197 - -
Mepo1g01999 828 MobiDBLite consensus disorder prediction 412 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01999 Mepo-Chr1 20472953 20482079 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01999 376 828 Homeobox Transcription Factor Family AT2G23760 53.150 1.56e-147 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Mepo1g01999 POX 1.3e-51 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01999 - - mtr:11411247 1367.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01999 1 20472953 20482079 Mepo1g01999 1 20472953 20482079 ECH
Mepo1g01999 1 20472953 20482079 Mepo5g00828 5 7934165 7943789 ECH
Mepo5g00828 5 7934165 7943789 Mepo1g01999 1 20472953 20482079 PCT