Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01995 ATGGCAATGCTTCATACCGATGGACATAATGAAGAACATATTTGCGTTGTAAATCGTGAATATGATATATCACAACTTGATGATGAAGTCAGTGACAGTTCAGTTGCAATGAAAGAGCCTCATATAGAAAACAAAATGAGCTTGCAAGAATCTACAGAAATGATCTTGTATGGAAGTGGAACAGTATCAAGGCCTGTAGATGAAATGGCTATTCAAATATTCATAGAACCTGGTACTAAGGATCGACAATGTCGAGCATATGTCAAAGACAAGGGAAGGCAGTGTGTGAGAACCGCAATTGGTAACAATATATACTGTTGTGCCCATTCCCCAAATAAAAAGGAAAGACGTCTTAAAGTAATCACTCCCATTTGTGGAGGTAAAACGGGTGCTGGCAATAGCTGTAAGTTTCATTCCCGTCCCGGATTTTCTTTTTGTAAGAGACATTGGCACAAAGCCGAGACGGGCCAGACCTCAAATTCAAAGCGTCGTACATTAAAGAGGAAAGCTGAAGAAAATTCTGGTGGTTCCCAGAACCTGATTTGCAAGGACTTGGTGTTGGCACATCCGGAAAGTCCATTGGAGATCAATCCAGTGTCGGTCATCAATGATGTTGATCCTTTCTTTGCAAATAACATCTTAGGCAAAACACTCACGCTTTCTGGTAATGATCATAATGAAGACTTTTGTATTGATAATGAGAATGCTGTTAAGGAAAAATTAGGGTCGTCGCGAAAGGTTATAGTGTTATGCAATGACATAAGCTTTGCGGCAGAATCAACTCCTGTGATATGTGTGGTAGATCTACAAGTACTAAATTATCTTTGTGAGCAAGAGCAATATGTATATCTTCCTAAGCCTTGGGAGATGTTTACCTATGTGACAAAGCCGATACTTGATCGATTGCGTAGTCTTGATTCTGAGGATCTGCAACTGTCTTGTAATTGCTTATCTTCTACTTGCTGTCCTGAAACGTGTGATCACGTATACCTTTTTGATGAAGAAAAGGACATATTTGGGAAACCAATGGCCGGAAGTTATTTCTTCGACATTGATGCTCGTGCTAACCATATGAGTAGATTGGTCGAAGGACATCCCCGATATGTCATTGATTCTACTACATATGGAAATGTGTCTAGGTTCATCAATAACAGCTGTTCACCCAATCTTGTGGATTACAGAGTTCTTGTAGAGGGCACGGATTGTAAGCATGCACATATCGGTCTTTACGCAAGTCGAGATATTGCTTTGCATGAAGAATTGACATATAATTATGACTATGAGCTTGTACCCGGAGAAGGTTATCCTTGTCTTTGTGGATCTTTGAAATGCTGA 1335 0.3993 MAMLHTDGHNEEHICVVNREYDISQLDDEVSDSSVAMKEPHIENKMSLQESTEMILYGSGTVSRPVDEMAIQIFIEPGTKDRQCRAYVKDKGRQCVRTAIGNNIYCCAHSPNKKERRLKVITPICGGKTGAGNSCKFHSRPGFSFCKRHWHKAETGQTSNSKRRTLKRKAEENSGGSQNLICKDLVLAHPESPLEINPVSVINDVDPFFANNILGKTLTLSGNDHNEDFCIDNENAVKEKLGSSRKVIVLCNDISFAAESTPVICVVDLQVLNYLCEQEQYVYLPKPWEMFTYVTKPILDRLRSLDSEDLQLSCNCLSSTCCPETCDHVYLFDEEKDIFGKPMAGSYFFDIDARANHMSRLVEGHPRYVIDSTTYGNVSRFINNSCSPNLVDYRVLVEGTDCKHAHIGLYASRDIALHEELTYNYDYELVPGEGYPCLCGSLKC 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01995 444 ProSiteProfiles SET domain profile. 227 426 IPR001214 GO:0005515
Mepo1g01995 444 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 346 444 - -
Mepo1g01995 444 SMART set_7 235 432 IPR001214 GO:0005515
Mepo1g01995 444 Gene3D SET domain 330 444 IPR046341 -
Mepo1g01995 444 SUPERFAMILY SET domain 243 439 IPR046341 -
Mepo1g01995 444 Pfam SET domain 333 425 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01995 Mepo-Chr1 20436871 20439677 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01995 346 444 C2H2 Transcription Factor Family AT2G23740 52.941 2.67e-25 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo1g01995 SET 8.1e-12 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01995 - - mtr:25501644 624.78