Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01992 ATGAATCCGTCTAGCCATAAAAAGTTTGAACAAATTTCCGCGGATAAGTTTCAAGGCGAAACATCACAAAACAACGGTAAAGAAGTAGAACCATCATTTTCTAAATGGTTGGAGGTGGATGAACCTGTGGCTGTGTGGTTCAAGTTGAGAGGGGAGTGGCATGCAGGCATCAAATGTGCAAGGGCTGATTGGCCCTTATCAGTTGTGAAAGACAAACCAACTAATGATAAGCAGAACAAATGTTTAGTAATTTTTTCTCCAGAAACAGGGAATTATTCATGGGTTGACATGATTCTTGTTCAATCAATCGATGAATTTCCAAAACCTATACCATATAAAACTTATCAAGAAGGATTGAAAATGGTACAAGACTTGGGGATTGCGCGATGGTTTATAATGCAAAAGCTCGCTGTCGAAATGCTCTACATGGTTGATCAGCTTCATCTTAATGCTTTGATAGAAGATTATCGTAATGTGACGGTTTGGAAGCAATTTGCTATGGAAGCTTCTCATTGTCAACGTTATTCAGATCTTGGAAGAATGGTTCAAAGGCTGCAAAATAGCATAATGCAACATTATATAAAAGACAATTGGAAAGTTCATTTCTCTGAGTCTTGGGCTGAAAGATGCCCGGGTGCAAACAGTGCTGAAATAATAGAGCAGCTTCAGGAGGAATTGTTTGATTCTATTTTGTGGAATGATGTCCACACTCTCCGCGATGCACCGACACAACAAAAATTAAATTCTGAGTGGAAAACATGGAACCATGATGTAATGAAATGGTTTTCCACATTTATTTCCTTTTCTAGCAACAGTAGCGCACATCAACATTCTTTTAGTAATGATGGTTTGTACCAAGCAAGTCTTCAAGATGGCAGCAAAAGGCCTAAACTTAATGTTCGCCGCGCAAATACATTTTCTAGACATGAAGGAATTGTGGAGGTACCTGTGGAAACCGCGCTTCCTAGTCAATTGATCAGTCCATTGAGTAAAGTCACAGTTCATCCTGTAGATTCTGAGATGATGTTTAATAATGGAACAATATCAAGGTCTGTAAATGAAATGGATTTTCAAATATCTGTAGAACCTGATACAAAGGATGATGCTGAGTATCGACGATGCCAAGCATACATTGAAGCCAAGGGAAGGCAATGTGTGAGAACTGCAATTGGAAATGATATATATTGTTGTGCACATTTCTCGAGGAAAAAAGAAAAATGTGCTAAAGTTCTTACTCCAATGTGTTGTGGTACAACTATTGTTGGTACCAAGTGTAAGCATCATTCCTTTCCCAGTTTTCCATTTTGCAAGAAACATATGCGCAATGTTGAGATGAACAAGAGCTCAAACTGCCATACATTGAAGAGGAAGGCTGAAGAAAGTTGTAGTGGTTCAAAGAGCCATATCAACAATGATTTGGTGTTGGTGCATCCAGAAAGTTCATTGGAGATCGATCCAACGGCGTTCACTGGTGATGATGATTCTGATGATGATTCTTTCTCTGCAAAGAACATATTAGGTGAAACGCTCATGCTTTCTGGTAATGATTACAATGAAATAGAGACTCTTCACCAGACAGGTTCTCCTAAATATGATAATGATCGTGTTAAATACTCATGTTTTGATAATGAGAATGCTAATAAGTGTAAGATCTGCTTTGAAGAATTTTCTAATGACCAAACACTTGGCGATCATTGGATGGAAAATCATATAAAGGAAGCCCGTTGGTTATTCAGAAGTTATGCTTGTGCCATTTGTTTTGATCCATTCTCTAACAAGAAACTACTGGAATCACACGTCCAGAATAGACACCATGTGCCGTTTATTGAAAATTGCCTGCTTTTACTATGTATTCCTTGTGGTAGTCATTTTGGAAATATGGAGGAATTATGGTTGCATGTTAAGTCAGTTCACCATGCCGAATTTAAGCTTGCAAAAGCTTCTGAGGAACTAACTTTGCCTACCAATGATGATCCTCATATAACTATTGAGCAGGGAAATGAAGCTTCTTTGGACAATAATAATTTTGAGAACCCAAGTGGTTCACGGAAGTTAAGTTGCAGGTTTTGTGGTTTGAAATTTGATTTACTGCCTGATCTCGGTCGTCATCATCAAGCTGCTCATATGGAACGTGGTCTAGCTAGGAGGCGTTTGGCAAAGAGGGGAGTTCGTTATTATGCTCACAGACTAAAACCGGGCACACTTAGCCGTCCGAAATCCAAAAGATGTTTTAAAGAAGCATCAAATAGGATCAAAAGAAGTGCAGGAGTTAATTTGAAGAGAAGAAATCAAGCAAGAAAGTTAAATGAGACAGGGGAAACATCCATGCAACAACCACATGTAAACGAGACAACATGTATTGCTGAATTGGAAGAATCTCAATGCTTAGAAGTTGCAAATATTTTGTTTTCTGATATTCATCAAACTCAACCGCAACCTAAAGACCTTGATATTTTATCAATCGCTTGCACTGCATGCTGCAAAGACAATCTTGAAGCCTCACTGAAGGAGAAATATGGATATTTGCCAGAAAAGATCTATTTGAAGGCAGCAAAACTTTGCAGTGAGAATGAACTTGTTGTGAATTGGCATCTAGATGGGTTCATTTGTCCTAGAGGATGTAATGCATTGAATGAACAAAACCGAAAGAAAATATATGCAAATGCATCAGATCCTGCAAGTATTGAAATGAAGCAAGATGAGTCTCAATCCATCATCAATTCAAAACATACAAGATTAGGATCGTCGCAGAAGGCTATAAAATTGTGCAATGACGTAAGCTCTGGGATGGAATCAACTCCTGTGATTTGTGTAATGGATCTACAAATACTAGACTCTCTTTGTGAGCAAGAGCAATATTTAAATCTTCATAGACCTTGGGAGAGCTTTACTTATGTAACAAAACCGATGTTTGGTCGATTGCCAAGTCATGACTATGAGGGTCTGCAATTGAAATGCCATTGCTCATCTTCTACCTGCTGTCGTGAAACTTGTGATCATGTATACCTTTTTGATAATGATTATGATACTGCAAAAGACATATTCGGGAAATCAATGCGCGGCAAGTTTCCATATGATAACAATGGTCGAATCATATTGGAGGAAGGTTATCTTGTGTATGAGTGCAACGAAGAGTGCAAATGTGATCAAACTTGTCCAAACAGAATATTGCAGAATGGAATTCGCGTGAAGTTGGAAATTTTTAAAACAAAGAAAAAGGGATGGGGTGTAAGGGCTGGTGAGGCTATTTCCCGCGGCACATTTGTGTGCGAGTACATTGGAGAGGTTTTAGACGAGCAAGAGGCACGCAACAGACGTGAAAGATATGGAAAAGAACATTGCAATTATTTCTATGATGTTGATGCTCATGTTAATGATATGAGCCGATTGATCGAAAGAGAGGCTCGATATGTCATTGATTCTACTAGATATGGAAATGTGTCTAGGTTCATCAACAACAGTTGTTCACCTAATCTTGTGAATTACCAAGTTCTTGTAGAGAGTATGGATTGTAAATGTTCACATATCGGTCTTTACGCAAGTCAAGATATTGCTAAGGGTGAAGAGTTAACCTACAATTATCACTATGAGCTTGTGGATGGAGAAGGATCTCCTTGTCTGTGTGGATCTTCGAAGTGCAGGAACCGCTTGTACTAG 3657 0.3861 MNPSSHKKFEQISADKFQGETSQNNGKEVEPSFSKWLEVDEPVAVWFKLRGEWHAGIKCARADWPLSVVKDKPTNDKQNKCLVIFSPETGNYSWVDMILVQSIDEFPKPIPYKTYQEGLKMVQDLGIARWFIMQKLAVEMLYMVDQLHLNALIEDYRNVTVWKQFAMEASHCQRYSDLGRMVQRLQNSIMQHYIKDNWKVHFSESWAERCPGANSAEIIEQLQEELFDSILWNDVHTLRDAPTQQKLNSEWKTWNHDVMKWFSTFISFSSNSSAHQHSFSNDGLYQASLQDGSKRPKLNVRRANTFSRHEGIVEVPVETALPSQLISPLSKVTVHPVDSEMMFNNGTISRSVNEMDFQISVEPDTKDDAEYRRCQAYIEAKGRQCVRTAIGNDIYCCAHFSRKKEKCAKVLTPMCCGTTIVGTKCKHHSFPSFPFCKKHMRNVEMNKSSNCHTLKRKAEESCSGSKSHINNDLVLVHPESSLEIDPTAFTGDDDSDDDSFSAKNILGETLMLSGNDYNEIETLHQTGSPKYDNDRVKYSCFDNENANKCKICFEEFSNDQTLGDHWMENHIKEARWLFRSYACAICFDPFSNKKLLESHVQNRHHVPFIENCLLLLCIPCGSHFGNMEELWLHVKSVHHAEFKLAKASEELTLPTNDDPHITIEQGNEASLDNNNFENPSGSRKLSCRFCGLKFDLLPDLGRHHQAAHMERGLARRRLAKRGVRYYAHRLKPGTLSRPKSKRCFKEASNRIKRSAGVNLKRRNQARKLNETGETSMQQPHVNETTCIAELEESQCLEVANILFSDIHQTQPQPKDLDILSIACTACCKDNLEASLKEKYGYLPEKIYLKAAKLCSENELVVNWHLDGFICPRGCNALNEQNRKKIYANASDPASIEMKQDESQSIINSKHTRLGSSQKAIKLCNDVSSGMESTPVICVMDLQILDSLCEQEQYLNLHRPWESFTYVTKPMFGRLPSHDYEGLQLKCHCSSSTCCRETCDHVYLFDNDYDTAKDIFGKSMRGKFPYDNNGRIILEEGYLVYECNEECKCDQTCPNRILQNGIRVKLEIFKTKKKGWGVRAGEAISRGTFVCEYIGEVLDEQEARNRRERYGKEHCNYFYDVDAHVNDMSRLIEREARYVIDSTRYGNVSRFINNSCSPNLVNYQVLVESMDCKCSHIGLYASQDIAKGEELTYNYHYELVDGEGSPCLCGSSKCRNRLY 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01992 1218 ProSiteProfiles Pre-SET domain profile. 984 1060 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo1g01992 1218 ProSitePatterns Zinc finger C2H2 type domain signature. 617 639 IPR013087 -
Mepo1g01992 1218 Pfam Zinc finger C2H2-type, 3 repeats 583 709 IPR040689 -
Mepo1g01992 1218 SMART c2h2final6 685 708 IPR013087 -
Mepo1g01992 1218 SMART c2h2final6 547 570 IPR013087 -
Mepo1g01992 1218 SMART c2h2final6 615 638 IPR013087 -
Mepo1g01992 1218 SMART c2h2final6 581 604 IPR013087 -
Mepo1g01992 1218 Pfam SET domain 1074 1194 IPR001214 GO:0005515
Mepo1g01992 1218 Gene3D SET domain 915 1218 IPR046341 -
Mepo1g01992 1218 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SUVR5 7 307 - -
Mepo1g01992 1218 ProSiteProfiles Post-SET domain profile. 1202 1218 IPR003616 -
Mepo1g01992 1218 MobiDBLite consensus disorder prediction 1 29 - -
Mepo1g01992 1218 SMART set_7 1063 1201 IPR001214 GO:0005515
Mepo1g01992 1218 SUPERFAMILY SET domain 914 1208 IPR046341 -
Mepo1g01992 1218 Gene3D Classic Zinc Finger 547 605 - -
Mepo1g01992 1218 ProSitePatterns Zinc finger C2H2 type domain signature. 687 708 IPR013087 -
Mepo1g01992 1218 MobiDBLite consensus disorder prediction 15 29 - -
Mepo1g01992 1218 ProSiteProfiles Zinc finger C2H2 type domain profile. 615 643 IPR013087 -
Mepo1g01992 1218 ProSiteProfiles SET domain profile. 1063 1195 IPR001214 GO:0005515
Mepo1g01992 1218 SMART preset_2 923 1047 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Mepo1g01992 1218 ProSitePatterns Zinc finger C2H2 type domain signature. 549 570 IPR013087 -
Mepo1g01992 1218 Pfam Pre-SET motif 954 1055 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01992 Mepo-Chr1 20403860 20412131 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01992 19 474 C2H2 Transcription Factor Family AT2G23740 38.182 5.54e-96 334
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Mepo1g01992 SET 7.8e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01992 - - mtr:11409723 2277.29