Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01981 ATGGAAGCGGTTCTCATTAAGATCGCTGCTGGGAGTGATGTTGTAGAAACACTCATCAACTTGGCTCGGCGTCGTGAAGCTGGAATCGTTATTTTGAGTGGTTTCGGTATTGTAACTGATGTTACCCTTCACAAACTCGCGTCTGATTCCTTTGATGTCATCGAAGGATTGTCCAATATGACATCGCTCTCTGGATACTTCATTGTCGATGGTAGTTTCGTACCTCCCCCGACCATGAACATTGTCTCGCCATTTTCCTCTTTCTCCATTTGCCTCTCCGACAGTCGTGGACATGTCTTTGGAGGGAAAATTGGCGGAAAAGTTAAGGCTGCTGGTGCTGTTTTGGTTACAGCCGCTTTTATTCTGAATCCAACGTTTCATAGGTTGGGTGTCGTCAATGGAAGGGTACAAGAAATGGATGACCCAGAAGATGTTGCTGGGGTTGTCATCAATGATGATGGTCATGCACCATAA 474 0.4578 MEAVLIKIAAGSDVVETLINLARRREAGIVILSGFGIVTDVTLHKLASDSFDVIEGLSNMTSLSGYFIVDGSFVPPPTMNIVSPFSSFSICLSDSRGHVFGGKIGGKVKAAGAVLVTAAFILNPTFHRLGVVNGRVQEMDDPEDVAGVVINDDGHAP 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01981 157 Gene3D - 3 139 - -
Mepo1g01981 157 CDD DUF296 5 120 IPR005175 -
Mepo1g01981 157 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 135 IPR014476 GO:0003680
Mepo1g01981 157 Pfam Plants and Prokaryotes Conserved (PCC) domain 4 119 IPR005175 -
Mepo1g01981 157 SUPERFAMILY AF0104/ALDC/Ptd012-like 3 129 - -
Mepo1g01981 157 ProSiteProfiles PPC domain profile profile. 1 151 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01981 Mepo-Chr1 20253977 20254450 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01981 1 129 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.582 2.35e-18 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01981 - - mtr:25501661 240.35