Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01964 ATGGCTATGGTTCTAGATGCTGTTGTTGGGAAATTAGTTGAAGAACTAATGAGTTCAGTTGTTGATATGAAGAACAAAGCTTTGAAGTTCAAACCAACTCTACAAAGATTAGAAGCTACCCTCCAATCATTAGGACCATTGATCAATCAAATAGATGAACTCAAAAAGAAATTAGATCATTCACCTAATGATACAAAGAGACTAATCAAACAAATGAAAGATGGAAATGAACTTGTTCTAAAATGTTCTGATGAAGACAAAATCCAGTGGTGGAATTGTTGTTACAAAAAAGCACAGTATCAAGAAGAGCTTGAAGCATTGGATGAAGAGATTAAAAGATTCTTTGGTCTTGATATGATAGCTCAAGGTGCAGTGACTGGATTGGAAACACTTTTGGAGATTAGAGAGTTTCATGCTGAATTTACAAATGCTAATGTTGGGAGAAATGAAAGAGTTGAATTAAGAGGTGTTTGTTTGCCACCTCAACCACCTGCTTTTATTGTTGGGTTGGATGGTCCTTTGAATGAGTTGAAGATGAGATTGTTGAAGGATGAGGTTAGTGTTTCTGTTGTTACAGTTACTGGTTCTGGTGGTTCGGGGAAATCTACGTTGGCAAAAAGGTTTTGTTGGGATGAAGAAGTAAAAGGTAAATTCAAGGAAAATATTTTCTTCATTACCTTTGCAAAAACACCAAAGCTGAATACTATAGTGCAGAAGCTGTATCAACACACTGGTTACCAAGTTCCGGATTTTCAAAGCGAAGAAGACACGTTTAACCAATTGGAACATTTGATGAAACAAGTTGTGAAGAAAGGACCAATATTGTTAGTCCTAGACGATGTTTGGCTAGGGTCAGAATCACTTCTTGATAATTTTGTGTTCGAGATTCCAAACTACAAGATTTTGGTGACATCAAGATTTGCAATTGGAAGATTTGGTCATCCATTCGTCTTGAAACCTCTTTCTGAAGCACATGCTATAAATCTGTTTAAACATTCAGCATCCTTAACTAAGAGCACCTCAGATGTTCCTGATGATGTTGTGAAAGAGATAGTAAGAGGGTGTAGCGGTTCTCCCTTGGCACTTCGAGTGAGTGGCAGATCGTTAATTAACGAACAACTGATAGTTTGGCTTAACAGAGCAAGGGAATTATCAGCTGGTAGGTCAATTCTTGATTCTAACAAGGACGTGCTTTCTTGTCTCCAAAAGAGCTTAGATGTTCTGGATCCTATGTCCATGGAGTGTTTTAGGGACCTTGGCTTATTTCCTGAAGATCAGAGGATCCCTGCTGCTGCCCTTATTGATATGTGGGCTGAACTAAGGAATGATGATGATGCAAGTGCAATGGAGAGGATTTATAAACTAGTCAACCTCAACTTGGCAGATATTATTGTTACAAGGAAAGTTGCAAGGGGCACAATTGACTACAACTACCATTATGTTACACTGCATGGTCTTCTTCGGGATCTAGCCATTCGCGACAATAGCCAAGAGGCAGAGGATAAGAGGAATAGACTCATAATTGACACAAGTGCAAATAATCTTCCTTCATGGTGGACTTCTGAGAATGAGTATCACATTGAAGCCCGCATATTATCCATATCAACTGATGAAACATTCACTTCAAAATGGTGTAACTTGCAACCAGCTGAAGTTGAGGTTTTAGTGTTAAACCTTAGAGAAAAGAAGTGTACACTACCAATGTTCATGAAAAAAATGAACAAGCTAAAAGTTTTGATAATCACAAATTACGACTTCTTTCCAGCTGAATTAGAGAATTTTGAGCTGCTCGATCATCTATCGAATCTCAAAAGAATCCGATTAGAGAAAGTTTTGGTTCCTTTCCTTGGAAAAACTGTATTACAATTGAAGAATCTTCAGAAGTGTTCATTTTTTATGTGCAATGTGAATAAAGCATTTGAAAATTGCACAATGGAAGATTCAGAAATGCTACCAAATTTGATGGAAATGAATTTTGACTATTGTGATATGGTGAAATTACCAAATGTGATTTCCAACATTGTATCTCTAAAGAAGCTTAGTATTACAAATTGTCATAAGCTTAGTGCACTTCATGAAGGAATCGGAAAGTTGGTCAATTTGGAATCACTAAGGCTAAGTTCATGCAGTGGTTTATTAGAGTTACCAAACTCAATCACAAATCTTCATGTGCTAAAGTTTCTTAACATTTCTGGTTGCATAAGCCTTAGTCAATTACCTGAGAACATTGGTGAGTTGGAGAAATTAGAAAAGCTTAATATGAGAGGTTGTTCAAATATAAGTGAATTACCATCCTCAGTTATGGAACTTGAAGGATTAAAGCATGTGGTATGTGGTGACGAAGAGACTGCTGAAAAATGGGAACCTTACAAAACTATCCTTGTTGATTTAAAGGTAGAGGTTGTTCAAGAAGATTTCAATTTGAATTTTCTTTACAATTAG 2442 0.3665 MAMVLDAVVGKLVEELMSSVVDMKNKALKFKPTLQRLEATLQSLGPLINQIDELKKKLDHSPNDTKRLIKQMKDGNELVLKCSDEDKIQWWNCCYKKAQYQEELEALDEEIKRFFGLDMIAQGAVTGLETLLEIREFHAEFTNANVGRNERVELRGVCLPPQPPAFIVGLDGPLNELKMRLLKDEVSVSVVTVTGSGGSGKSTLAKRFCWDEEVKGKFKENIFFITFAKTPKLNTIVQKLYQHTGYQVPDFQSEEDTFNQLEHLMKQVVKKGPILLVLDDVWLGSESLLDNFVFEIPNYKILVTSRFAIGRFGHPFVLKPLSEAHAINLFKHSASLTKSTSDVPDDVVKEIVRGCSGSPLALRVSGRSLINEQLIVWLNRARELSAGRSILDSNKDVLSCLQKSLDVLDPMSMECFRDLGLFPEDQRIPAAALIDMWAELRNDDDASAMERIYKLVNLNLADIIVTRKVARGTIDYNYHYVTLHGLLRDLAIRDNSQEAEDKRNRLIIDTSANNLPSWWTSENEYHIEARILSISTDETFTSKWCNLQPAEVEVLVLNLREKKCTLPMFMKKMNKLKVLIITNYDFFPAELENFELLDHLSNLKRIRLEKVLVPFLGKTVLQLKNLQKCSFFMCNVNKAFENCTMEDSEMLPNLMEMNFDYCDMVKLPNVISNIVSLKKLSITNCHKLSALHEGIGKLVNLESLRLSSCSGLLELPNSITNLHVLKFLNISGCISLSQLPENIGELEKLEKLNMRGCSNISELPSSVMELEGLKHVVCGDEETAEKWEPYKTILVDLKVEVVQEDFNLNFLYN 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01964 813 Coils Coil 97 117 - -
Mepo1g01964 813 Gene3D Ribonuclease Inhibitor 494 790 IPR032675 -
Mepo1g01964 813 Gene3D - 320 404 IPR042197 -
Mepo1g01964 813 Gene3D - 405 493 IPR036388 -
Mepo1g01964 813 ProSiteProfiles RPW8 domain profile. 1 153 IPR008808 -
Mepo1g01964 813 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 7 137 IPR008808 -
Mepo1g01964 813 Gene3D - 150 310 IPR027417 -
Mepo1g01964 813 PRINTS Disease resistance protein signature 190 205 - -
Mepo1g01964 813 PRINTS Disease resistance protein signature 268 282 - -
Mepo1g01964 813 PRINTS Disease resistance protein signature 355 369 - -
Mepo1g01964 813 PRINTS Disease resistance protein signature 696 712 - -
Mepo1g01964 813 Pfam NB-ARC domain 173 385 IPR002182 GO:0043531
Mepo1g01964 813 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 419 IPR027417 -
Mepo1g01964 813 SUPERFAMILY RNI-like 556 776 - -
Mepo1g01964 813 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 2 811 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01964 Mepo-Chr1 20020007 20024235 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01964 168 373 WRKY Transcription Factor Family AT5G45050 25.806 4.68e-09 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01964 - - mtr:25502906 1275.38