Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01962 ATGGGTCGTAAAAAGTTTGATGGTGCTTGGGAATGCATAAATGGAGGGTTACACTTGCAGTGCTGTGGGAATCTGTCACCTGAGTCACACTATCCGTCGATGACGACGTACCCAAAAGGAACGTCGTCATCGATGGGAGAAGGCTCAGAGCTGGCCATAACTGTTGTTTTCTGCGTTATGGGAATGACATGTGCTGCCTGTGCTGGATCAGTTGAGAAAGCCATCAAACGTTTACCTGGCATTAGAGAGGCTGTTGTTGATGTCTTGAATGATAAAGCCCAGGTTCTATATCTTCCCACCATTGTTAACGAAGAGAGCATACGTGAGGCCATTGAAGATGCTGGATTTGAGGCCAAATCCATGGAAGATGATAGTTCCAACAATACTTCGTTTCAAATATGTAGAATACACATAGGTGGCATGACTTGTACTTCTTGCTCCTCCAACGTGCAATCAGCTCTTCAATCCCTTCGTGGGGTGCAAATAGCACAAGTGGCCTTAGCAACTGAAGAAGCAGAAATTCGTTATGATCCGAAGATTATAAGCTACACTCAACTAATGGAAACTATATCAAACACAGGTTTTAACCCTATATTAATAAGCAAAGGTGAACACATAAGCAAAATTGAACTTAAAATTGATGGCATAAAAAATGAACAATCAATGTATATCATTGAACAATCTCTTAGGACACTCCAAGGTGTTGAAACCATAGAAACATATTTAGACATTAATAAAATTGTGTTAACTTATAAACCTTATATGACTGGTCCAAGAACCTTCATTGAACTCATTGAATCTTCAGGATCAGGGTGTTTTAGAGCCACAATATTTCCAAATGATGGTGGAAGAAAAGCACATAAACAAGAGGAAATTAATAGATACTTTAAATTATTAATTTGGAGTTTGGTTTTTACTATTCCTGTTTTTTTAACATCTATGGTTCTTATGTATATACCTGGAGTTAAAGATGTTTTAGAGGTTAAAATTGTCAATATGTTGAGTATTGGATTGCTCATAAGGTGGGAATTTTCGACACCGGTACAGTTTGTCATAGGAAGAAGATTTTATGTTGGAGCCTATAAAGCTTTGAGCAAAGGTTATGCAAACATGGATTTGTTGATAGCATTGGGAACAAATGCAGCTTATTTCTATTCTGTTTATGTTGTTGGAAGAGCTACATTTTCTTCCCATTTCGAAGGAAGTGATTTTTTCGAAACAAGTTCTATGCTTATTTCTTTTATTCTACTTGGCAAGTATTTGGAAGTGTTGGCTAAAGGGAAAACATCGCAGGCTATTGCGAAACTCATGGATTTAACCCCCGATACAGCAACCTTACTAACTCTAGATGATGATAAGGGAAATGTTATAGGTGAAAGAGAAATTGATAGCAGGTTGATACAGAAGAATGATGTGATCAAAGTTGTGCCGGGCGCGAAAGTAGCATCGGATGGTTTTGTTGTTTGGGGACAAAGTCATGTAAATGAGAGTATGATAACTGGTGAGGCAAAGCCTGTTGCTAAGATGAAGGGTGATATGGTGATTGGTGGTACTGTGAATGAAAATGGTGTTTTGCATGTTAAGGTAACAAGGGTTGGATCAGAAACTGCACTTTCACAGATTGTTAGACTTGTTGAGTCTGCTCAGATGGCTAAAGCTCCTGTCCAGAAATATGCTGACCAAATTTCTAAATATTTTGTTCCTATAGTGATTGTGTTATCTCTTTCAACATGGATATCATGGTTTGTAGCTGGAAAATTGCATTCATACCCAAAATCATGGATACCATCTTCTATGAATAGTTTTGAGCTTGCACTTCAGTTTGGAATTTCAGTCATGGTCATAGCCTGTCCTTGTGCTCTAGGCCTAGCCACTCCTACAGCGGTCATGGTTGGTACCGGAGTTGGTGCAACTCAAGGTGTGTTGATCAAAGGTGGCCAAGCATTAGAAAGTGCACACAAGGTGAATTGCATTGTGTTTGATAAGACAGGAACTCTCACTATTGGGAAGCCGGTGGTTGTAACTACAAAACTCTTCAATAACATGTCAGTTCAAGATTTCTATGAACTTGTTGCTGCAGCAGAGGTGAATAGTGAACATCCAATAGCAAAGTCCATTGTTGATCATGCCAAAAATATCACACAAGATGAAAAAAATAATTCATCATGGCCAGAAGCAAAAGAATTTGTGTCTATTGCAGGACATGGAGTGAAGGCAATTGTTCAAAACAAGGAAATAATGGTTGGAAATAAAAAACTGATGTTAGATCATAACATAGCTATTTCAGTGGAAGCTGAAGAAATATTAGCAGAAGCTGAAAACATGGCTCAAACAGGAATTTTAGTATCATTGGATGGAGAAATTGTTGGAGTTTTGGCTGTGTCTGATCCATTGAAACCTGATGCAAAAGAAGTTATTTCTATTCTTAAATCCATGAAAATAAAGAGCATAATGGTGACAGGTGATAATTGGGGAACTGCAAATTCTATAGCTAGACAAGCTGGTATTGAAACTGTCATGGCTGAGGCTCAACCTGAGACTAAAGCTACTAAAGTAAAGGAATTGCAGAATTCTGGATACACTGTAGGAATGGTAGGAGATGGGATCAATGATTCACCTGCACTAGTAGCAGCTGATGTTGGAATGGCAATTGGTGCTGGCACAGACATTGCTATTGAAGCAGCTGACATTGTTCTTATGAAGAGTAACTTAGAGGATATAATAATTGCCATTGACCTTGCAAAGAAAACTTTCTCACGTATACGTCTAAATTATATTTGGGCTTTAGGTTATAATATTCTAGCCATTCCTATTGCTGCTGGCATACTTTTTCCTTCTACTAGATTTAGGTTACCACCTTGGATTGCTGGAGCTGCAATGGCTGCTTCTTCTATCAGTGTTGTTTGCTCTTCTCTCTTGTTGAAGAAATACAAGAAACCAACCAAGGTGAATAACTTGGAGATGAATGGTATTCAGATTGAATAA 2985 0.3836 MGRKKFDGAWECINGGLHLQCCGNLSPESHYPSMTTYPKGTSSSMGEGSELAITVVFCVMGMTCAACAGSVEKAIKRLPGIREAVVDVLNDKAQVLYLPTIVNEESIREAIEDAGFEAKSMEDDSSNNTSFQICRIHIGGMTCTSCSSNVQSALQSLRGVQIAQVALATEEAEIRYDPKIISYTQLMETISNTGFNPILISKGEHISKIELKIDGIKNEQSMYIIEQSLRTLQGVETIETYLDINKIVLTYKPYMTGPRTFIELIESSGSGCFRATIFPNDGGRKAHKQEEINRYFKLLIWSLVFTIPVFLTSMVLMYIPGVKDVLEVKIVNMLSIGLLIRWEFSTPVQFVIGRRFYVGAYKALSKGYANMDLLIALGTNAAYFYSVYVVGRATFSSHFEGSDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMDLTPDTATLLTLDDDKGNVIGEREIDSRLIQKNDVIKVVPGAKVASDGFVVWGQSHVNESMITGEAKPVAKMKGDMVIGGTVNENGVLHVKVTRVGSETALSQIVRLVESAQMAKAPVQKYADQISKYFVPIVIVLSLSTWISWFVAGKLHSYPKSWIPSSMNSFELALQFGISVMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESAHKVNCIVFDKTGTLTIGKPVVVTTKLFNNMSVQDFYELVAAAEVNSEHPIAKSIVDHAKNITQDEKNNSSWPEAKEFVSIAGHGVKAIVQNKEIMVGNKKLMLDHNIAISVEAEEILAEAENMAQTGILVSLDGEIVGVLAVSDPLKPDAKEVISILKSMKIKSIMVTGDNWGTANSIARQAGIETVMAEAQPETKATKVKELQNSGYTVGMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDIIIAIDLAKKTFSRIRLNYIWALGYNILAIPIAAGILFPSTRFRLPPWIAGAAMAASSISVVCSSLLLKKYKKPTKVNNLEMNGIQIE 994
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01962 994 PRINTS P-type cation-transporting ATPase superfamily signature 888 900 - -
Mepo1g01962 994 PRINTS P-type cation-transporting ATPase superfamily signature 790 801 - -
Mepo1g01962 994 PRINTS P-type cation-transporting ATPase superfamily signature 659 673 - -
Mepo1g01962 994 PRINTS P-type cation-transporting ATPase superfamily signature 812 822 - -
Mepo1g01962 994 PRINTS P-type cation-transporting ATPase superfamily signature 865 884 - -
Mepo1g01962 994 PRINTS P-type cation-transporting ATPase superfamily signature 495 509 - -
Mepo1g01962 994 ProSitePatterns Heavy-metal-associated domain. 59 88 IPR017969 GO:0046872
Mepo1g01962 994 Gene3D - 626 922 IPR023214 -
Mepo1g01962 994 SUPERFAMILY HMA, heavy metal-associated domain 130 203 IPR036163 GO:0046872
Mepo1g01962 994 Pfam Heavy-metal-associated domain 136 195 IPR006121 GO:0046872
Mepo1g01962 994 Pfam Heavy-metal-associated domain 58 117 IPR006121 GO:0046872
Mepo1g01962 994 Pfam haloacid dehalogenase-like hydrolase 655 879 - -
Mepo1g01962 994 SUPERFAMILY Calcium ATPase, transmembrane domain M 407 933 IPR023298 -
Mepo1g01962 994 Gene3D - 54 124 - -
Mepo1g01962 994 ProSiteProfiles Heavy-metal-associated domain profile. 53 119 IPR006121 GO:0046872
Mepo1g01962 994 SFLD Haloacid Dehalogenase 641 916 - -
Mepo1g01962 994 CDD HMA 59 119 IPR006121 GO:0046872
Mepo1g01962 994 FunFam ATPase copper transporting beta 127 202 - -
Mepo1g01962 994 SUPERFAMILY HMA, heavy metal-associated domain 53 124 IPR036163 GO:0046872
Mepo1g01962 994 NCBIfam heavy metal translocating P-type ATPase 371 974 IPR027256 GO:0006812|GO:0016020|GO:0019829
Mepo1g01962 994 SUPERFAMILY Calcium ATPase, transduction domain A 460 545 IPR008250 -
Mepo1g01962 994 SUPERFAMILY HAD-like 658 971 IPR036412 -
Mepo1g01962 994 Pfam E1-E2 ATPase 439 637 - -
Mepo1g01962 994 ProSiteProfiles Heavy-metal-associated domain profile. 132 198 IPR006121 GO:0046872
Mepo1g01962 994 CDD HMA 138 195 IPR006121 GO:0046872
Mepo1g01962 994 ProSiteProfiles Heavy-metal-associated domain profile. 207 273 IPR006121 GO:0046872
Mepo1g01962 994 FunFam Copper-transporting ATPase HMA5 52 123 - -
Mepo1g01962 994 CDD P-type_ATPase_Cu-like 299 976 - -
Mepo1g01962 994 NCBIfam HAD-IC family P-type ATPase 411 947 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo1g01962 994 ProSitePatterns Heavy-metal-associated domain. 138 167 IPR017969 GO:0046872
Mepo1g01962 994 FunFam Copper-transporting ATPase 1, putative 426 549 - -
Mepo1g01962 994 SUPERFAMILY HMA, heavy metal-associated domain 204 272 IPR036163 GO:0046872
Mepo1g01962 994 Gene3D - 130 198 - -
Mepo1g01962 994 FunFam Probable copper-transporting ATPase HMA5 789 922 - -
Mepo1g01962 994 NCBIfam copper ion binding protein 57 118 IPR006122 GO:0005507
Mepo1g01962 994 SFLD p-type atpase 641 916 IPR044492 -
Mepo1g01962 994 Gene3D - 426 549 - -
Mepo1g01962 994 Gene3D - 666 745 IPR023299 GO:0000166
Mepo1g01962 994 Gene3D - 746 796 IPR023299 GO:0000166
Mepo1g01962 994 PANTHER P-TYPE CATION-TRANSPORTING ATPASE 22 991 - -
Mepo1g01962 994 ProSitePatterns E1-E2 ATPases phosphorylation site. 661 667 IPR018303 -
Mepo1g01962 994 PRINTS Copper-transporting ATPase 1 signature 80 103 - -
Mepo1g01962 994 PRINTS Copper-transporting ATPase 1 signature 156 177 - -
Mepo1g01962 994 PRINTS Copper-transporting ATPase 1 signature 54 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01962 Mepo-Chr1 19993960 20002741 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01962 56 994 Primary Pumps ATPases AT1G63440 72.004 0.0 1405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01962 K17686 - gmx:100817431 1502.65