Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01947 ATGGCAAGAGAGATTATTCGCCCGTGCGCAGCGTGCAAGCATCTCCGTCGGGAGTGCGACTCAAGCTGTGACCTTGCTCCTTACTTTCCACCCGACAACCCGGAGCGTTTCATCAAGGTACACTCTGTGTTTGGAAAGAACAATGTGTCAAATATGTTGAAAAAACTTGATGTTTCACATCATGAACAAGTTATTGAATCCTTGGTGTATGAGGCTGAGGCCTGGTTGAGGGACCCTATCCATGGTTGTGCGGGTCCAGCAAATGACCTTCAAGGTAGGTTGAATGAAGCTCAAAAGGAGCTCAAGAGTGTGAAGAATGAACTAGCCAAATACCTCAGTCCTCAGGTCGTTGAATTTGTTCTCGCCTTTCCTGATTGTTTCGGCTTTAAGCCAAATGCATCTGCACCTACTATGACAGTCGGTGCAGGACAATTGGCTTTTAATCAGCTGCCAGCTGCTGAGTTGACGGCTCAGCAGATTCACAACTTAGAAGTGTTAAAACAAAAGCTTCTTAGTGGCCCCGATTGTGATGATGGGTTGGCAGGATTCCAGATGGATGTTAATGTTCCTGTTGAAAATGGTGGCACTAGTACTAGGTCCCACCCTGTTGGTGGTGGTTCTGTCAGTGGCAGTGGTGGCTCGGCAAGATTCCAGATGGGTGCTGATGTTCCTGTTCGTGATTCTGGGTTGGCAGGATCCCAGATGCTTCATGACGTTCCTCCTGTTGATGCTCCTTTTGTGTTCCCTTCTTCTAGGGCTGATACTTTTGACAATGGTAGCACTAGCAACCAGCAAGAATAA 801 0.4757 MAREIIRPCAACKHLRRECDSSCDLAPYFPPDNPERFIKVHSVFGKNNVSNMLKKLDVSHHEQVIESLVYEAEAWLRDPIHGCAGPANDLQGRLNEAQKELKSVKNELAKYLSPQVVEFVLAFPDCFGFKPNASAPTMTVGAGQLAFNQLPAAELTAQQIHNLEVLKQKLLSGPDCDDGLAGFQMDVNVPVENGGTSTRSHPVGGGSVSGSGGSARFQMGADVPVRDSGLAGSQMLHDVPPVDAPFVFPSSRADTFDNGSTSNQQE 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01947 266 Coils Coil 87 107 - -
Mepo1g01947 266 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Mepo1g01947 266 MobiDBLite consensus disorder prediction 194 213 - -
Mepo1g01947 266 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 144 - -
Mepo1g01947 266 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01947 Mepo-Chr1 19680612 19681546 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01947 8 162 AS2 family AT5G66870 41.401 3.67e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo1g01947 LOB 1.8e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01947 - - mtr:11411349 456.447