Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01942 ATGACAGAGATTCAACTTATCTCAACTAGTACAATCCAAGCAACAAATTGTTATGACTCAACTCACAAAATTATCCATTTAACTCCATGGGATCTCAGAGCACTCAAAAAAGGACCAATCCAACAAGGCCTTCTTTACCATAAACCCAAAACCAACCAAATCCAACATCTTAAACAAACACTTTCCTCCACTCTCAATTTCTTTCCACCCCTCGTTGGTCGTCTTGTAATATCTCAACACGACGAACATAACAACGTCTCATGTTCCATCATTTGCAATAATGCTGGTGCGTTGTTTGTCCAAGCCACAGCAGAAAACACTACTGTTGCTGACATCCTTCAACCCAAATATGTTCCTCCCATTCTTCGCTCATTCTTTCAATTCAATGGAGTTAAAAACTACGAAGGTACATCAAAACCATTACTTTCAGTTCAAGTAACAGAGTTAGTTGATGGTATCTTTATAGGTTTTGAAATTAACCACGTGGTTGTAGATGCCAAGTCGTTTTGGCTTTTCGTCAATTCTTGGGTTGAAATCTCACAAGGTTTCAATCAACCAACAAAAATCCCTTCTTTCGAACGTTTCTTTCCGAACAACATTAAACATCCCATACAGTTTCCTTTCACAAAGGAAGCACAAAGTCAACAATGTGAAGTGTCATTTTATCGAATCTTTCACTACACAAAAGATCAGGTTCAACAACTTAAATCAAAAGCTAATGCAGAAATTAGTAGTAGTCGTGGTGGTGATGATAAAATAATGATATCTTCGTTGCAAGCGCTTTTAAGTCACTTTTGGCGTTTAATTGTAAGTAAACAAAATCTAAAACCAGAAGAAACAGTTGTTTTCGTGTTACTAATAGATTGTAGGACAAGAACGTGTCCAAAGTTAGCAGAGAATTATTTCGGAAATGGGATCGGAGCGGCTGCAGTTGTAATCATGAAAGTAGAGGACTTAATTAAGGAAGGAGGGTTTGGTAAGGCTGCTATGGAAATGAACAAGATGATTTCTAGTGAAGCTCATCATGAAAAGGTAATGAATAACTATGAGTCTTGGTTGAAAACACCAATTATAGATGAGCCAGGTTTGAGAAGTAGTAATTTGATGCTCGTAAACAATTCCCCAAGATTCGATTTTTATGGTAATGACTTTGGTTGGGGTAAGCCAATTGCAGCTAGGCGTGGGGTTGGACTTCAAACGAATAATGGTAAAGTTTCTTTGTTTGGTGGGGCAGAAGAAGGTAGCATTGATATTCAAGTTTGTCTTCCTTATGATATCTTGGAGGCTATGGGAAATGGTCATGCTATGTGTGTTTAA 1317 0.3766 MTEIQLISTSTIQATNCYDSTHKIIHLTPWDLRALKKGPIQQGLLYHKPKTNQIQHLKQTLSSTLNFFPPLVGRLVISQHDEHNNVSCSIICNNAGALFVQATAENTTVADILQPKYVPPILRSFFQFNGVKNYEGTSKPLLSVQVTELVDGIFIGFEINHVVVDAKSFWLFVNSWVEISQGFNQPTKIPSFERFFPNNIKHPIQFPFTKEAQSQQCEVSFYRIFHYTKDQVQQLKSKANAEISSSRGGDDKIMISSLQALLSHFWRLIVSKQNLKPEETVVFVLLIDCRTRTCPKLAENYFGNGIGAAAVVIMKVEDLIKEGGFGKAAMEMNKMISSEAHHEKVMNNYESWLKTPIIDEPGLRSSNLMLVNNSPRFDFYGNDFGWGKPIAARRGVGLQTNNGKVSLFGGAEEGSIDIQVCLPYDILEAMGNGHAMCV 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01942 438 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 6 432 - -
Mepo1g01942 438 Gene3D - 207 432 IPR023213 -
Mepo1g01942 438 Gene3D - 1 205 IPR023213 -
Mepo1g01942 438 Pfam Transferase family 20 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01942 Mepo-Chr1 19650282 19651912 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01942 55 422 Monolignol Biosynthesis Gene Families AT5G48930 26.098 4.19e-20 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01942 - - mtr:120577401 643.269