Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01937 ATGGGTCTCTGCACTTCAAAACCACTCTCTTCACCCAATTCAGAAACCACTATTCACATTCAATCACAACCAGAACAACCCTCTTCCACCAATGTAGTAGAAATTCAAAACCCTAAAAAATCACCCTTTTTCCCCTTTTACACACCAAGTCCAGCTCACAATTTATTCTCCGGCAAAACTCCGGCGACACCTAGAACTCCGAGGAGATTCTTCCGACCACCGTCGCCGGCAAAGCACATTAGGTCACTGCTAGCTCGCCGTCATGGCTCCGTTAAGCCGAACGGTGCAGCTAGTATATCAGAAGGAAGTGAAGGTGAAAGTGTTGCTCCTCTTGATAAGAATTTCGGGTTTTCGAAGCATTTTGGTAGTAAGTATCAGCTTGGTGAAGAAGTTGGTAGAGGACATTTTGGTTATACTTGTTCTGCTGTTGTTAAGGTTAATTATAAGGGTGAGATTAAGGGTCATCGTGTTGCTGTTAAGGTTATTCAGAAAGTTAAGATGACAACTGCTATTGCTATTGAGGATGTTAGAAGGGAAGTTAAGATCTTGAGAGCTTTGAATGGACACAAGAATTTGATTAAATTTTATGAGGCTTATGAAGACCATGATAATGTTTATATAGTCATGGAGTTGTGTGAAGGAGGGGAGCTTTTGGATAGAATACTATCGAGAGGTGGGAAATACTCGGAGGAAGATGCAAAAGTTGTCATGACACAAATACTGAATGTTGTTGCATTTTGCCATTTACAAGGTGTTGTTCATCGCGATCTTAAACCTGAGAACTTCTTATTTTCAACCAAAGATGAGAACTCAGAGCTGAAGGCCATTGACTTTGGTTTGTCGGATTTTGTTAAACCAGATGAACGGCTTAATGATATCGTTGGTAGCGCATACTATGTGGCTCCCGAGGTTTTGCATAGAGCTTACAGCACAGAGGCTGACGTCTGGAGTATTGGTGTGATCGCATACATTTTATTATGTGGAAGTCGTCCATTTTGGGCACGGACTGAATCTGGGATCTTTCGTTCCGTATTGAAAGCAGATCCAAGTTTTGATGAACCTCCTTGGCCTTCTTTGTCAGATGAGGCACAAGATTTTGTTAAGCGATTACTAAATAAAGATCCAAGGAAGAGAATGACAGCAGCACAGGCATTAGGTCATCCATGGATTAAAAGTTACAAGATTGTAAAAGTACCGTTAGATATTCTAGTGTTCAAGCTCATGAAGGCATACATGCGTTCCTCCTCTCTACGAAAAGCAGCTTTAAGGGCTCTGTCCAAGACAGTAGCTACTGATGAGCTGAATTATTTGAAGGAGCAGTTTGCACTTCTAGAACCAAACAAAAATGGAACCATTAACTTGGAAAATATCAAAGCGGTCTTGATGAAGAATGCGACGGATGCAATGAAGGAGTCGCGAATTCCCGATCTTGTGGCATCACTTAATGCCTTGCAATATAGAAGGATGGATTTTGATGAGTTCTGTACAGCTGCACTTAGTGTTCATCAACTCGAAGCACTTGATAGGTGGGAGCAACATGCACGCTGTGCCTATGAAATTTTTGAAAAGGATGGAAACAGAGCTATAATGATTGAGGAACTAGCTTCGGAGCTTGGCCTTGGTCCATCTGTACCTGTTCATGCCGTTCTTCATGACTGGATTAGGCACACCGATGGAAAGTTAAGCTTCCTTGGATTTGTTAAGTTGCTGCACGGTCCATCTCGAAGTCTTGTAAAACCTCAATAA 1746 0.4192 MGLCTSKPLSSPNSETTIHIQSQPEQPSSTNVVEIQNPKKSPFFPFYTPSPAHNLFSGKTPATPRTPRRFFRPPSPAKHIRSLLARRHGSVKPNGAASISEGSEGESVAPLDKNFGFSKHFGSKYQLGEEVGRGHFGYTCSAVVKVNYKGEIKGHRVAVKVIQKVKMTTAIAIEDVRREVKILRALNGHKNLIKFYEAYEDHDNVYIVMELCEGGELLDRILSRGGKYSEEDAKVVMTQILNVVAFCHLQGVVHRDLKPENFLFSTKDENSELKAIDFGLSDFVKPDERLNDIVGSAYYVAPEVLHRAYSTEADVWSIGVIAYILLCGSRPFWARTESGIFRSVLKADPSFDEPPWPSLSDEAQDFVKRLLNKDPRKRMTAAQALGHPWIKSYKIVKVPLDILVFKLMKAYMRSSSLRKAALRALSKTVATDELNYLKEQFALLEPNKNGTINLENIKAVLMKNATDAMKESRIPDLVASLNALQYRRMDFDEFCTAALSVHQLEALDRWEQHARCAYEIFEKDGNRAIMIEELASELGLGPSVPVHAVLHDWIRHTDGKLSFLGFVKLLHGPSRSLVKPQ 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01937 581 ProSiteProfiles Protein kinase domain profile. 125 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01937 581 SMART serkin_6 125 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01937 581 Gene3D Transferase(Phosphotransferase) domain 1 218 413 - -
Mepo1g01937 581 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Mepo1g01937 581 MobiDBLite consensus disorder prediction 56 75 - -
Mepo1g01937 581 FunFam CDPK-related kinase 1 427 499 - -
Mepo1g01937 581 SUPERFAMILY Protein kinase-like (PK-like) 122 417 IPR011009 -
Mepo1g01937 581 SUPERFAMILY EF-hand 418 572 IPR011992 -
Mepo1g01937 581 CDD STKc_CAMK 124 389 - -
Mepo1g01937 581 MobiDBLite consensus disorder prediction 1 31 - -
Mepo1g01937 581 FunFam CDPK-related kinase 1 118 216 - -
Mepo1g01937 581 ProSitePatterns Protein kinases ATP-binding region signature. 131 160 IPR017441 GO:0005524
Mepo1g01937 581 FunFam CDPK-related kinase 3 117 292 - -
Mepo1g01937 581 Gene3D Phosphorylase Kinase; domain 1 118 217 - -
Mepo1g01937 581 Pfam Protein kinase domain 125 390 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01937 581 Gene3D - 414 572 - -
Mepo1g01937 581 PANTHER SERINE/THREONINE-PROTEIN KINASE 110 556 - -
Mepo1g01937 581 ProSiteProfiles EF-hand calcium-binding domain profile. 432 467 IPR002048 GO:0005509
Mepo1g01937 581 FunFam Calcium-dependent protein kinase SK5 300 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01937 Mepo-Chr1 19595463 19599686 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01937 1 579 EF-hand Containing Proteins AT3G50530 71.160 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mepo1g01937 Pkinase 5.5e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01937 K00924 - gmx:100803313 928.317