Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01900 ATGGCTGTTCCAAATTCTGTTTCTAATGATAATGTTGGAACGTTATTGTTACCTGATAAGGAACAAGAAAATTCTATCATAGTATCCACCCTCATTCACGTTCTCTCCTCAAATAATGTTGCTGTTCCTGCTTCTCATACGGGTATCAGTACTCAAGAAAACTACGAGATATTAAACAATTTATCTCATAACAACCAAAAATACAAGGAAAGGGAATCAGATAAAACAGCCACGTCATCAAGTGCAAGTGGGTCCCTCTTGTCTTACCAAAACCAATATGATCCTGACACGTGTCGTGTATGCAAAATCAACGGCTGTCTCGGTTGCAGATTATTCTTTGAGAAGGATAAAGGGGAGAATAAGAAGAAATACAGAGGAGTGAGGCAGAGAGCATGGGGAAAATGGGTGGCAGAGATAAGAGACCCAAAAAGAGCAACTCGTGTATGGCTTGGTACTTTTCAAACAGCTGAAAATGCTGCAAGAGCTTATGATCAAGCTGCTATTAAGTTTCATGGAGCTAGAGCTAAGATTAATTTTGATTTCTCTGATTATGAAGTTGCTTGTGATGAGAAGAAGCAAAGTGTGACGGTGCAGGATTGTGTTGGTGAGGTCTCAGGAGTGAAGAACCAAACAAAAACTACTATCCTATCATTTGGACCACCAGAAGTGAACTAG 675 0.3985 MAVPNSVSNDNVGTLLLPDKEQENSIIVSTLIHVLSSNNVAVPASHTGISTQENYEILNNLSHNNQKYKERESDKTATSSSASGSLLSYQNQYDPDTCRVCKINGCLGCRLFFEKDKGENKKKYRGVRQRAWGKWVAEIRDPKRATRVWLGTFQTAENAARAYDQAAIKFHGARAKINFDFSDYEVACDEKKQSVTVQDCVGEVSGVKNQTKTTILSFGPPEVN 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01900 224 Pfam AP2 domain 123 172 IPR001471 GO:0003700|GO:0006355
Mepo1g01900 224 CDD AP2 122 180 IPR001471 GO:0003700|GO:0006355
Mepo1g01900 224 ProSiteProfiles AP2/ERF domain profile. 123 180 IPR001471 GO:0003700|GO:0006355
Mepo1g01900 224 PANTHER DNA-BINDING DOMAIN 79 189 IPR044808 GO:0003700|GO:0009873
Mepo1g01900 224 SMART rav1_2 123 186 IPR001471 GO:0003700|GO:0006355
Mepo1g01900 224 FunFam Ethylene-responsive transcription factor 2 122 181 - -
Mepo1g01900 224 PRINTS Ethylene responsive element binding protein signature 146 162 IPR001471 GO:0003700|GO:0006355
Mepo1g01900 224 PRINTS Ethylene responsive element binding protein signature 124 135 IPR001471 GO:0003700|GO:0006355
Mepo1g01900 224 Gene3D AP2/ERF domain 122 181 IPR036955 GO:0003700|GO:0006355
Mepo1g01900 224 SUPERFAMILY DNA-binding domain 123 181 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01900 Mepo-Chr1 19096911 19098000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01900 21 184 AP2-EREBP Transcription Factor Family AT4G34410 41.584 1.94e-32 117
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo1g01900 AP2 5e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01900 - - psat:127136619 232.261