Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01899 ATGTCTAAGAGGTTGGCAGCAGCACCATTTTTGACCAAGACCTATGAGATGATTGATGATCCTCTCACTAATGATGTGATTTCTTGGGATGAAAGTGGTAACACTTTTGTTGTGTTGAAACAAGCTGATTTTTCAAGGGATTTGCTTCCTAAATATTTCAAACACAACAATTTCTCAAGCTTTGTTCGTCAACTTAACACCTATGGGTTTAGGAAAACTGCTTCCGACAAATGGGAATTCGCTCAAGAGAATTTCAAGAGAGGAGAGACCGAGCTGCTTCCGACAATCAAGCGTCGGAAGACCCAGTCCCCCGCAGTTGTAAGATCTGTTGGAGTTGGTGGGAACTCACCTTCGAACTCTGGTCCTGAAGATATGGGATCAACTTCAACTGGATCGCTGGACCGATCAGACTTATCCATCGAGAACAAAAGACTCAAAATGGATAATGAGAAGTTAACCGGTGAACTGGTACTTGCAAAGAAAAAGTGCGCAGAATTGCTTGCTTATCTTCAGAGCGATCTCAACATCGGGGCACTTGCAAAGAAAAAGTGCGAAGAATTGCTTGCTTATCTTCAGGGCAATCTCAACATCGGGGCTGATGAAATTAACCGCATCCTCGGCAAAGGAACAATCGGGTCCAGCCATGATACGGATGATGATGAGGACAATATGGTACGTGAATGTGGGAAGGGTTTGAAACTGTTTGGGGTTTGGCTAAAGGGAGAAGAGGGGAAAGACAAGGTGGAGATTGACACTGCCAAGGGTAGCTGCCACAAGAGAGGGCGTGAAGACCCAATTGATGGTGCCAACAATGAGTTCAAGGCTGTTGCCTAG 834 0.4508 MSKRLAAAPFLTKTYEMIDDPLTNDVISWDESGNTFVVLKQADFSRDLLPKYFKHNNFSSFVRQLNTYGFRKTASDKWEFAQENFKRGETELLPTIKRRKTQSPAVVRSVGVGGNSPSNSGPEDMGSTSTGSLDRSDLSIENKRLKMDNEKLTGELVLAKKKCAELLAYLQSDLNIGALAKKKCEELLAYLQGNLNIGADEINRILGKGTIGSSHDTDDDEDNMVRECGKGLKLFGVWLKGEEGKDKVEIDTAKGSCHKRGREDPIDGANNEFKAVA 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01899 277 MobiDBLite consensus disorder prediction 100 140 - -
Mepo1g01899 277 PRINTS Heat shock factor (HSF) domain signature 48 60 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo1g01899 277 PRINTS Heat shock factor (HSF) domain signature 10 33 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo1g01899 277 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo1g01899 277 MobiDBLite consensus disorder prediction 108 136 - -
Mepo1g01899 277 SUPERFAMILY "Winged helix" DNA-binding domain 8 99 IPR036390 -
Mepo1g01899 277 Gene3D - 3 101 IPR036388 -
Mepo1g01899 277 FunFam Heat stress transcription factor B-4 2 100 - -
Mepo1g01899 277 SMART hsfneu3 6 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
Mepo1g01899 277 Coils Coil 135 162 - -
Mepo1g01899 277 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 8 181 IPR027725 -
Mepo1g01899 277 Pfam HSF-type DNA-binding 10 99 IPR000232 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01899 Mepo-Chr1 19087501 19092279 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01899 2 245 HSF AT4G36990 43.071 7.89e-58 184
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Mepo1g01899 HSF_DNA-bind 7.1e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01899 K09419 - gmx:100801638 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01899 1 19087501 19092279 Mepo1g01899 1 19087501 19092279 ECH
Mepo5g00765 5 7243747 7246676 Mepo1g01899 1 19087501 19092279 PCT