Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01892 ATGGATTGGGTACGAGGAGAAACTGTTGGAAGAGGAAGCTTTGCAACTGTTAATTTAGTTATACCTAAAGCCAATTCATATTCAACTCCGACAGCCGTCAAAACATCCGAGGTTTCAACCTCGTCTTCACTCAAAAACGAGAAACATGTTCTTCATCAACTTGGTTCTTGTCAAAGAATCATTCCTTGTTTCGGAGATGATTACACTTTTGAGAATGGCAAAGAGTATTACAATTTATTCCTCGAATACGCATCCGCGGGTACTCTCTCCGATCAACTGAAACTCAATGGTGGTCGGATACCGGAGAAACACATTCGTCGTTACACGAGGTCAATCGTCGAGGGACTTGATCATATTCATAGCAATGGATTCGTTCATTGTGATATAAAGCTTCAAAATATATTGGTATTCAATAATGGTGAAATCAAAATTGCTGATTTTGGTCTTGCCAAGAAAACAGGGGAAAAACAGAGTTTTGAATGCAGAGGAACTCCACTTTTTATGTCGCCGGAATCAGTGAAAGACGGCGAGCATGAATCTCCGGCGGATATATGGGCACTTGGGTGTGCAGTGGTGGAAATGGTAACTGGAAAACCAGCATGGAATTTGGAGAAAGATTCAAATATGTGGTCATTGTTGCTTCGAATTGGTGCCGGAGAAGAATCGCCGATGATACCCGAAGAATTATCGAAAGAAGGGAAAGATTTTGTTGAGAAGTGTTTTGTGAAAGATCCAAGAAAAAGATGGACGGCTGAGATGCTTTTGAATCATCCTTTTGTTGAAGAAGTGAAGAATGTTAATGAATCATCACCAAGAAATCACTTTGATTTCAATGATTGGGTTTCTAGTGTTAGTGATTCGGTTCCGAATTCACCGGAGCCGGAGGAGTTAAGTCCATGGGATTTTGATTCTAAATTTTGCTCGGCGGTGGACCGGCTGCAGCAGCTTGTGACTGATGAACGGTTGGTGTGTTCGTCGGAATTAGATAGTTGGATTAGTGTTAGGTGA 1008 0.4147 MDWVRGETVGRGSFATVNLVIPKANSYSTPTAVKTSEVSTSSSLKNEKHVLHQLGSCQRIIPCFGDDYTFENGKEYYNLFLEYASAGTLSDQLKLNGGRIPEKHIRRYTRSIVEGLDHIHSNGFVHCDIKLQNILVFNNGEIKIADFGLAKKTGEKQSFECRGTPLFMSPESVKDGEHESPADIWALGCAVVEMVTGKPAWNLEKDSNMWSLLLRIGAGEESPMIPEELSKEGKDFVEKCFVKDPRKRWTAEMLLNHPFVEEVKNVNESSPRNHFDFNDWVSSVSDSVPNSPEPEELSPWDFDSKFCSAVDRLQQLVTDERLVCSSELDSWISVR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01892 335 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 292 - -
Mepo1g01892 335 Pfam Protein kinase domain 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01892 335 Gene3D Transferase(Phosphotransferase) domain 1 2 296 - -
Mepo1g01892 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mepo1g01892 335 FunFam Mitogen-activated protein kinase kinase kinase 17 2 284 - -
Mepo1g01892 335 ProSitePatterns Protein kinases ATP-binding region signature. 9 34 IPR017441 GO:0005524
Mepo1g01892 335 ProSiteProfiles Protein kinase domain profile. 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01892 335 CDD STKc_MAPKKK 2 260 - -
Mepo1g01892 335 SMART serkin_6 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01892 335 SUPERFAMILY Protein kinase-like (PK-like) 3 297 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01892 Mepo-Chr1 18989276 18990605 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01892 1 335 MAP Kinase Kinase Kinase AT4G36950 52.436 1.16e-116 339
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mepo1g01892 Pkinase 2.3e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01892 - - gmx:100798607 446.817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01892 1 18989276 18990605 Mepo1g01892 1 18989276 18990605 ECH
Mepo5g00726 5 6988222 6989280 Mepo1g01892 1 18989276 18990605 PCT