Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01890 ATGGATTGGGTACGAGGAGAAACAGTTGGAAGAGGAAGCTTTGCAACTGTTAATTTAGTTATACCCAAAGGCAGTTCAAATTCCACTCCGACAGCCGTCAAAACATCCGAGGTTTCAACCTCGTCTTCACTCAAAAACGAGAAACATGTTCTTCATCAACTTGGTTCTTGTCAAAGAATCATTCCTTGTTTCGGAGATGATTATACTCTTGAGAATGGTAAAGAGTATTACAATTTATTCCTCGAATACGCCTCAGCCGGTACTCTCTCCGATCAACTGAAACTCAATGGTGGGCAGATACCGGAGCAACACATTCGTCGTTACACGAGGTCAATCGTCGAGGGGCTTGATCATATTCATCGCAATGGATTCGTTCATTGTGATATAAAGCTTCAAAATATTTTGGTATTCAATGATGGTGAAATCAAAATTGCTGATTTTGGTCTTGCCAAGAAAACGGGGGAAGAACAGAGGTTTGAATGCAGGGGAACTCCACTTTTTATGTCGCCGGAATCAGTGAATAACAGCGAGCATGAATCTCCGGCGGATATTTGGGCACTTGGGTGTGCAGTGGTGGAAATGGTAACTGGAAAACCAGCATGGAATTTGGAGAAAGATTCAAATATGTGGTCATTGTTGCTTCAAATTGGTGCCGGAAAAGAATCGCCGGTGATACCCGAAGAATTGTCTAAAGAAGGAAAAGATTTTGTTGAGAAGTGTTTTGTGAAAGATCCAAGAAAAAGATGGACGGCTGAGATGCTTTTGAATCATCCTTTTGTTGATGAAGTGAAGAATGTTAATGAATCATCACCAAGAAATCATTTTGATTTCAATGATTGGGTTTCTAGTGTTTGTGATTCGCTTCCGAATTCACCGGAATCTGAAGAATCAAGTCCATGGGATTTTGATTCTAAATTTTGCTCCGCGGTGGACCGGCTACGGCAGCTTGTGACTGATCAAGGGCCGATGAGTTGGTCGGAATCAGATAGTTGGATTAGTGTTAGGTGA 1008 0.4177 MDWVRGETVGRGSFATVNLVIPKGSSNSTPTAVKTSEVSTSSSLKNEKHVLHQLGSCQRIIPCFGDDYTLENGKEYYNLFLEYASAGTLSDQLKLNGGQIPEQHIRRYTRSIVEGLDHIHRNGFVHCDIKLQNILVFNDGEIKIADFGLAKKTGEEQRFECRGTPLFMSPESVNNSEHESPADIWALGCAVVEMVTGKPAWNLEKDSNMWSLLLQIGAGKESPVIPEELSKEGKDFVEKCFVKDPRKRWTAEMLLNHPFVDEVKNVNESSPRNHFDFNDWVSSVCDSLPNSPESEESSPWDFDSKFCSAVDRLRQLVTDQGPMSWSESDSWISVR 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01890 335 SMART serkin_6 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01890 335 Pfam Protein kinase domain 5 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01890 335 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Mepo1g01890 335 ProSiteProfiles Protein kinase domain profile. 3 260 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01890 335 ProSitePatterns Protein kinases ATP-binding region signature. 9 34 IPR017441 GO:0005524
Mepo1g01890 335 SUPERFAMILY Protein kinase-like (PK-like) 3 297 IPR011009 -
Mepo1g01890 335 Gene3D Transferase(Phosphotransferase) domain 1 2 299 - -
Mepo1g01890 335 CDD STKc_MAPKKK 2 260 - -
Mepo1g01890 335 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01890 Mepo-Chr1 18944757 18945970 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01890 1 335 MAP Kinase Kinase Kinase AT4G36950 54.046 7.23e-122 352
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Mepo1g01890 Pkinase 3.4e-57 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01890 - - gmx:100798607 451.825