Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01879 ATGGATTCCATCAAAGTTATATCCAAAACAACAGTTCAAGCACCAATTGACAACAATAATCTCAATTCAACTGATTATCAGAAAATTGATTTAACACCATGGGATCTTCAATTCCTTCAACTTGAAACCATTCAAAAAGGCCTTCTTTTCCACCAACCCATTCCAAACCAAAACCAAATCAACCATTTGAAACAAACACTTTCCACAACACTTTCCTATTTCCCACCCTTGGCAGGCCGTCTCGTAATCACCCAACACAACGTGACCACAAACAACAGCAACACATCATGTTCTATCATTTGCAACAACTTTGGTGCTCTCTTCGTCCACGCAAAAGCGGAAAACACAACTGTATCAGACATCCTTAAACCAAACTACGCTCCTTCCATTGTTCAATCATTTTTCCCACTAAACGGTGTTAAAAACCACGAAGCAACTTCACAACCAATCCTTGCAGTTCAAGTAACGGAGTTAACTAACGGCATCTTTATTGGTTTCACTCTCAACCATGTTGTTTCAGACGGCAAGTCATTTTGGCATTTCGTCAATTCTTGGTCTGAAATCTCAAAAAACTCCCACAAAATATCCAAACTCCCTTCATTTCAACGTTGGTTCCCAAATGATGTTGAACTTCCAATACGATTTCCTTTTACAAAAACCGAATCACAAAGTAGAAAACCGCGACAGAACTTACCTGAAAGAATATTCCATTTCACAAAGGAGAAAATCGCGGAACTGAAATCAAAAGCAAATGAAGAAAACAAAACAGAGAATGTTCAAATCAAAATATCTTCGCTTCAAGCGTTGTTAACTCACGTATGGCGATGTGTTGTTCGATGCAAAAAAATCGACCCAGAACAAGATTTTCGTTACGTTTTAACTATAGGTGTTAGACCAAGGATGATTCTTCCGCTTGACGAGGGTTATTTTGGAAATGCAGCAATCTTTGGTGGGGTAACAATGAAAGCGGGGGAGATTCTGGAATGTGGGATTGGAAAAGTTGCTTTGGAGATGAACAAGATGATTATGTTGCGTTCTGATGAGAAAATAAGAGATGATTATGAGTGTTGGTTGAGAATGCCGAAGTTGTTTGAAGTTGGTAGTTTGGCAGGTGGTAATTCATTGGCGACGAGTAGTTCTCAGAGGTTTGATGTTTATGGTAATGATTTTGGTTGGGGGAAGCCGGTAGGGGTTCGAAGTGGGGGTTCTAATAAAAGAAATGGGAAGATTACTGTGTTTGCTGGAGCTGAAGAAGGTAGTATAGATATTGAAGTTTGTCTTTCTTTTGAGATTTTGGAGGCTTTGGGAAATGATGCCGAGTTCAGGGTTCCTACCTCTACTTAA 1344 0.3943 MDSIKVISKTTVQAPIDNNNLNSTDYQKIDLTPWDLQFLQLETIQKGLLFHQPIPNQNQINHLKQTLSTTLSYFPPLAGRLVITQHNVTTNNSNTSCSIICNNFGALFVHAKAENTTVSDILKPNYAPSIVQSFFPLNGVKNHEATSQPILAVQVTELTNGIFIGFTLNHVVSDGKSFWHFVNSWSEISKNSHKISKLPSFQRWFPNDVELPIRFPFTKTESQSRKPRQNLPERIFHFTKEKIAELKSKANEENKTENVQIKISSLQALLTHVWRCVVRCKKIDPEQDFRYVLTIGVRPRMILPLDEGYFGNAAIFGGVTMKAGEILECGIGKVALEMNKMIMLRSDEKIRDDYECWLRMPKLFEVGSLAGGNSLATSSSQRFDVYGNDFGWGKPVGVRSGGSNKRNGKITVFAGAEEGSIDIEVCLSFEILEALGNDAEFRVPTST 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01879 447 Pfam Transferase family 24 441 - -
Mepo1g01879 447 Gene3D - 216 437 IPR023213 -
Mepo1g01879 447 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 7 441 - -
Mepo1g01879 447 Gene3D - 2 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01879 Mepo-Chr1 18807312 18809098 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01879 48 433 Monolignol Biosynthesis Gene Families AT5G48930 25.490 8.27e-29 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01879 - - gmx:100500257 531.561