Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01870 ATGTGGGATCTTAATGGCTCACCTTGTAAGAGAAAAGAAGATGAAAAATCTGAAGGATGTTCTTCACTCAAGACATCAATAGATGGAGATGAAGATAAAGCAAAAAGGGTTGGTGGATCTGTTTCAAATTCAAGCTCTTCAGCTATAGTAATAGAAGAAGATTCTGAAGAAGACAATAGCAACAAAGACATGATGAAGAAAAGAAACAGTAAGATATTTGGTTTCTCCGTAACTCAAGAAGAAGAAGAAGAAGAAAATTCCTTAGACAGTGAAAATTTTCCTGTGACAAGACAGTTTTTTCCTATGGATCAAGAGTCTGATGATATGGTTGTAGCAGCATCATGTGGTGGAAATGGAACATCTTCATCTTCTTCTAGTTTTCCTCGTGCTCATTGGGTAGGTGTGAAATTTTGTCAATCAGAAACACTTGGAGGTGGAAAATCAGTAGAAGTTTCATCTTCTTCTTCACAACCTATGAAGAAAAGTAGAAGAGGACCAAGGTCAAGAAGTTCACAATATAGAGGAGTTACTTTTTACAGAAGAACAGGTCGATGGGAATCACATATATGGGATTGTGGAAAACAAGTGTATCTTGGTGGATTTGACACAGCACATGCAGCTGCTCGTGCATATGATAGAGCAGCTATTAAGTTTAGAGGAGTTGAGGCTGATATAAACTTTAACATTGAAGATTATGAAGAAGACTTGAAGCAGATGACTAATTTAACAAAAGAAGAGTTTGTACATGTACTTCGTCGACAAAGCACTGGTTTTCCAAGAGGAAGCTCTAAATATAGAGGTGTTACATTGCACAAATGTGGAAGATGGGAGGCAAGAATGGGACAATTTTTAGGAAAAAAGTACGTTTATCTGGGCTTGTTTGACACCGAGGTTGAAGCTGCAAGGGCTTATGACAAAGCAGCAATAAAATGCAATGGTAAAGAGGCAGTCACCAATTTTGATCCAAGCATATATGACAACGAGCTTAATAATTCTGCAGAACCAGCAAGTAATGCTGGTGATCATAATTTGGATTTAAGTTTGGGAAATTCAAGTTCAAAGCCTATCAATAATACTCAAGCAAATCATGCATCTGATCAATCTAATTGGCATCATGGGGGAAACAAGCCTAAGCTTGTGAATATACTCCCAAAACCATATAATAGACCAAACAACATTGAAGCATATGGAAGGGATTTGCATGGAGAGAGTGAAGCATTGCGGATGCTAAGTCAAACTCACCTTCATTCTTCATCATCAAATGAAATGCATAGATATGCTCCTTTTAGAGATCAGTCTCAAATGCTTCAAAGTTTTGCACATACTCACCCCCCAAATTTTCATTTTCCCAGCAGCAGCTATGGAAGCCGAGTTGGAAGTGATCTTTCATTATCAACAAGCAATCATCATCAACAACAACAATGGCAATCAGGGCCACATTATTTAGCAACTGCTGCTGCAGCATCATCAGGATTCCCACCTCAGATTAGACCACCCTCTTCTTCTCAAGCTTGGCAGCACATAAATGGCTTCCACTCTCTCATGAGACCCTCTTGA 1557 0.3866 MWDLNGSPCKRKEDEKSEGCSSLKTSIDGDEDKAKRVGGSVSNSSSSAIVIEEDSEEDNSNKDMMKKRNSKIFGFSVTQEEEEEENSLDSENFPVTRQFFPMDQESDDMVVAASCGGNGTSSSSSSFPRAHWVGVKFCQSETLGGGKSVEVSSSSSQPMKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVEADINFNIEDYEEDLKQMTNLTKEEFVHVLRRQSTGFPRGSSKYRGVTLHKCGRWEARMGQFLGKKYVYLGLFDTEVEAARAYDKAAIKCNGKEAVTNFDPSIYDNELNNSAEPASNAGDHNLDLSLGNSSSKPINNTQANHASDQSNWHHGGNKPKLVNILPKPYNRPNNIEAYGRDLHGESEALRMLSQTHLHSSSSNEMHRYAPFRDQSQMLQSFAHTHPPNFHFPSSSYGSRVGSDLSLSTSNHHQQQQWQSGPHYLATAAAASSGFPPQIRPPSSSQAWQHINGFHSLMRPS 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01870 518 MobiDBLite consensus disorder prediction 1 37 - -
Mepo1g01870 518 FunFam AP2-like ethylene-responsive transcription factor 171 230 - -
Mepo1g01870 518 MobiDBLite consensus disorder prediction 145 173 - -
Mepo1g01870 518 FunFam AP2-like ethylene-responsive transcription factor 263 323 - -
Mepo1g01870 518 Pfam AP2 domain 172 220 IPR001471 GO:0003700|GO:0006355
Mepo1g01870 518 Pfam AP2 domain 263 312 IPR001471 GO:0003700|GO:0006355
Mepo1g01870 518 MobiDBLite consensus disorder prediction 328 374 - -
Mepo1g01870 518 CDD AP2 263 323 IPR001471 GO:0003700|GO:0006355
Mepo1g01870 518 MobiDBLite consensus disorder prediction 145 161 - -
Mepo1g01870 518 PRINTS Ethylene responsive element binding protein signature 265 276 IPR001471 GO:0003700|GO:0006355
Mepo1g01870 518 PRINTS Ethylene responsive element binding protein signature 303 323 IPR001471 GO:0003700|GO:0006355
Mepo1g01870 518 SUPERFAMILY DNA-binding domain 263 323 IPR016177 GO:0003677
Mepo1g01870 518 MobiDBLite consensus disorder prediction 1 68 - -
Mepo1g01870 518 ProSiteProfiles AP2/ERF domain profile. 172 228 IPR001471 GO:0003700|GO:0006355
Mepo1g01870 518 Gene3D AP2/ERF domain 171 230 IPR036955 GO:0003700|GO:0006355
Mepo1g01870 518 Gene3D AP2/ERF domain 263 322 IPR036955 GO:0003700|GO:0006355
Mepo1g01870 518 MobiDBLite consensus disorder prediction 450 477 - -
Mepo1g01870 518 CDD AP2 172 229 IPR001471 GO:0003700|GO:0006355
Mepo1g01870 518 SUPERFAMILY DNA-binding domain 171 229 IPR016177 GO:0003677
Mepo1g01870 518 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 91 408 - -
Mepo1g01870 518 ProSiteProfiles AP2/ERF domain profile. 264 321 IPR001471 GO:0003700|GO:0006355
Mepo1g01870 518 SMART rav1_2 172 234 IPR001471 GO:0003700|GO:0006355
Mepo1g01870 518 SMART rav1_2 264 327 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01870 Mepo-Chr1 18715447 18719109 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01870 1 518 AP2-EREBP Transcription Factor Family AT4G36920 53.645 4.88e-131 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-AP2 Mepo1g01870 AP2 8.8e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01870 K09284 - gmx:100792442 689.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01870 1 18715447 18719109 Mepo1g01870 1 18715447 18719109 ECH
Mepo5g00708 5 6811454 6814936 Mepo1g01870 1 18715447 18719109 PCT