Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01867 ATGCCTCGTTCAATGAAACTCTTCTTCCCTCTCTTATTTTACTTTTTCTTCACATTAGTTTCCTCTACAAACTCTACACTATCACAAGACGCAGTATCTTTATTATCATTCAAACAAAACGCAGACCAAAACAACAAACTACTCTATACACTAAACGAACCCTACGACTATTGCGAATGGCAAGGAGTCAAATGTGCACAAGGCAGAGTAGTACGCTACGTCGTTCAATCCTTAAACCTCACCGGTTTTTTCTCACCAAACACTTTAACCCGGCTCGACCAACTCCGAGTCATGAGTCTCCGTAATAATTCCCTCTATGGACCCATTCCAGATCTTTCTCCACTCACAAACCTCAAATCACTTTTCCTCGACAGGAATAATTTCTCCGGTTCATTCCCTTCTTCTCTCCTCTTCCTCCACCGGCTCACCACTCTTTCTCTTTCACATAACAACCTTACCGGTTCACTTCCGGTTCAGTTAACTCTTCTCGACCGTCTCATTATACTCCGCCTTGACTCAAACTCATTCACTGGTTCTCTTCCTTCTCTTAACCAAACTGATTTAAAAGTTTTCAACATCTCTGCTAATAACCTCACCGGTCCGGTTCCTGTTACGAAAACTCTTTCACGGTTTAAACCGGCTTTGTTTTCAGATAACTCGGGTTTATGCGGTGAGATTATACATAAACAATGTGGTCATCGTTCTAGATTCTTCGGTGGTTCTTCTAACGCCACCGCGCCGTTGAGCCAAAGCGAGGAATCACAAGGAATTGTGGTGGTTCCGTCTTCAAAGAGAAACAAAAACCACAAAAAAACCGGTTTGGTTATCGGGTTCATAGTTGCTGGTTTTATATTTCTAGCTGTTTCTACTATTATTGTAATTGCATTGGTTAAAAAGCAGAACACCGGAGAAAAATTGGAGTCACCGGAAAATTTACGGTCTTCTACTTCACCGGTCATGGAAGTAATGGAAGTGAGAACAGTGGAAAATGATAAGAAGGTGAAAAAAATGGAAGAAGCTCACAAGAGTGGGAAGTTAGTGTTCTGCTGTGGTGAGGTGCAGGAGTATACACTGGAGCAGCTGATGAGAGCTTCTGCTGAGCTTTTAGGAAGAGGGAATGTGGGGGCAACTTACAAGGCGGTGATGGATTCGCGGTTGATATTGACGGTTAAGAGGTTGGATGCCGGAAAAACTGGTGGGACGAGTGGGGAGGATTTTCAGAAGCATATGGAGATGGTAGGGAGACTTTGTCACCCCAATCTGGTTCCTTTGAAGGCATTTTTTCAGGCTAAAGGAGAAAGGCTTGTTATCTATGAGTATCAACCTAATGGAAGTCTCTTCAATCTTGTTCATGGTTCAAGATCGGCGAGAGCGAAGCCGCTGCATTGGACATCATGCTTAAAAATTGCGGAAGATGTAGCACATGGACTTGCTTATATACATCAAGTTTCGTCTCTGGTTCATGGCAATTTAAAATCCTCTAATGTCCTTCTTGGCGGGGACTTTGAAGCTTGTGTTACGGACTATTGTTTAGCCTTCCTTACAGATTCGTCATTGATAGAAGATCCTGATTCTACAGCCTATAAAGCGCCAGAGGTTCGAAAATCTAACCGTAGGGCAACTGCAAAGTCTGATGTGTATGCTTTTGGTGTGTTGTTGTTGGAGCTTTTGACGGGTAAACATCCTTCCAAACATCCTTTCCTTGCACCAGCAGATTTGCAAGATTGGGTTAGAGCAATGAGGGATGATGATTTTAGCGAAGATAACCGGCTAGAAATGCTCACTGAGGTTGCCAGTATTTGCAGTGCAACCTCCCCGGAGCAGAGGCCAGCTATGTGGCAAGTCCTTAAGATGATACAAGGAATAAAGGATAGTGTTTCAATGGAGGAGACTGAACTCACTGGACTCTCATAG 1914 0.4336 MPRSMKLFFPLLFYFFFTLVSSTNSTLSQDAVSLLSFKQNADQNNKLLYTLNEPYDYCEWQGVKCAQGRVVRYVVQSLNLTGFFSPNTLTRLDQLRVMSLRNNSLYGPIPDLSPLTNLKSLFLDRNNFSGSFPSSLLFLHRLTTLSLSHNNLTGSLPVQLTLLDRLIILRLDSNSFTGSLPSLNQTDLKVFNISANNLTGPVPVTKTLSRFKPALFSDNSGLCGEIIHKQCGHRSRFFGGSSNATAPLSQSEESQGIVVVPSSKRNKNHKKTGLVIGFIVAGFIFLAVSTIIVIALVKKQNTGEKLESPENLRSSTSPVMEVMEVRTVENDKKVKKMEEAHKSGKLVFCCGEVQEYTLEQLMRASAELLGRGNVGATYKAVMDSRLILTVKRLDAGKTGGTSGEDFQKHMEMVGRLCHPNLVPLKAFFQAKGERLVIYEYQPNGSLFNLVHGSRSARAKPLHWTSCLKIAEDVAHGLAYIHQVSSLVHGNLKSSNVLLGGDFEACVTDYCLAFLTDSSLIEDPDSTAYKAPEVRKSNRRATAKSDVYAFGVLLLELLTGKHPSKHPFLAPADLQDWVRAMRDDDFSEDNRLEMLTEVASICSATSPEQRPAMWQVLKMIQGIKDSVSMEETELTGLS 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01867 637 FunFam Probable inactive receptor kinase At5g67200 29 139 - -
Mepo1g01867 637 Gene3D Transferase(Phosphotransferase) domain 1 442 634 - -
Mepo1g01867 637 SUPERFAMILY L domain-like 28 224 - -
Mepo1g01867 637 Gene3D Ribonuclease Inhibitor 137 225 IPR032675 -
Mepo1g01867 637 Gene3D Ribonuclease Inhibitor 29 136 IPR032675 -
Mepo1g01867 637 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 12 625 IPR046959 -
Mepo1g01867 637 Pfam Protein kinase domain 366 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01867 637 ProSiteProfiles Protein kinase domain profile. 363 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01867 637 ProSiteProfiles Leucine-rich repeat profile. 141 163 IPR001611 GO:0005515
Mepo1g01867 637 Gene3D Phosphorylase Kinase; domain 1 327 440 - -
Mepo1g01867 637 SUPERFAMILY Protein kinase-like (PK-like) 367 626 IPR011009 -
Mepo1g01867 637 SMART serkin_6 363 628 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01867 Mepo-Chr1 18639368 18643064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01867 24 630 Receptor kinase-like Gene Family AT3G50230 53.198 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo1g01867 Pkinase 1e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01867 - - gmx:100783086 880.937