Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01861 ATGGCCGTGGAGCTCATGACAGGCTACAACAGAAACCAAACTTTCACAACCAAAGCAGAAGAAAATGCTGTCCAAGAAGCAGCTTCTGGTTTAGAAAGTGTTGAAAAACTCATAAAACTTCTCTCAGAAGCACGTCACAAATACCAACCTTCTTCATCTTCTTCCTCTTCTTTTTCACCTTCAAACCCTAACAACAACAACAACACTACTATGGATATAGAAAGAGATTGCAAAGCTGTTGCAGACATAGCTGTTTCCAAGTTCAAACGTGTTATTTCATTGCTTGAAAAAACAAGAACTGGTCATGCTCGTTTCAGAAAAGCACCTTTACCACAGCCACCACCATCACAAACCCTACAAGTTCAACCTTCTGAACCAATGATTTTCAACGCTACACCTTTGCAACAGATTCCACCAACTGTTTCTACTTCCCTTCACCGTCCTATAATCAAGAGAAATGATTCTTCAAAAACTCTTAATTTTTCATACTCTTCTGCTGGTAATTCTTTCATTTCTTCACTCACCGGCGACGACAACAAACAACCTTCGATGTCGTCGCCGGCGTGTGCTTTTCAGATTACAAATCTGTCTCATGTTTCTTCTGTTGGTAAGCCACCACTCTCTTCTTCTTCATTGAAAAGGAAGTGTAGCTCTGAAACTTTGGGTTCTGGAAAGTGTGGTAGTTCTTCTAGCCGTTGTCATTGTTCCAAAAAAAGTAGAAAAATGAGATTGAAGAGGGTTGTTAGGGTTCCTGCAATTAGCTTGAAGATGGCTGATATTCCACCAGATGATTATTCTTGGAGAAAATATGGTCAGAAACCTATTAAAGGTTCACCTCATCCAAGGGGATACTACAAGTGCAGTAGTGTGAGAGGGTGTCCAGCAAGAAAGCATGTAGAGAGAGCTCTTGATGATGCTTCTATGCTGGTAGTTACCTATGAAGGAGAGCACAATCACTCTCTTTCTGCAGCTGATGCTAGTAATCTCATTTTAGAATCATCATAG 1005 0.406 MAVELMTGYNRNQTFTTKAEENAVQEAASGLESVEKLIKLLSEARHKYQPSSSSSSSFSPSNPNNNNNTTMDIERDCKAVADIAVSKFKRVISLLEKTRTGHARFRKAPLPQPPPSQTLQVQPSEPMIFNATPLQQIPPTVSTSLHRPIIKRNDSSKTLNFSYSSAGNSFISSLTGDDNKQPSMSSPACAFQITNLSHVSSVGKPPLSSSSLKRKCSSETLGSGKCGSSSSRCHCSKKSRKMRLKRVVRVPAISLKMADIPPDDYSWRKYGQKPIKGSPHPRGYYKCSSVRGCPARKHVERALDDASMLVVTYEGEHNHSLSAADASNLILESS 334
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01861 334 Gene3D WRKY domain 248 322 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g01861 334 ProSiteProfiles WRKY domain profile. 256 322 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g01861 334 SMART WRKY_cls 261 321 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g01861 334 MobiDBLite consensus disorder prediction 45 71 - -
Mepo1g01861 334 SUPERFAMILY WRKY DNA-binding domain 258 321 IPR036576 GO:0003700|GO:0006355|GO:0043565
Mepo1g01861 334 Pfam Plant zinc cluster domain 213 259 IPR018872 -
Mepo1g01861 334 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 24 326 IPR044810 GO:0003700
Mepo1g01861 334 Pfam WRKY DNA -binding domain 263 319 IPR003657 GO:0003700|GO:0006355|GO:0043565
Mepo1g01861 334 FunFam WRKY transcription factor 65 245 322 - -
Mepo1g01861 334 MobiDBLite consensus disorder prediction 46 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01861 Mepo-Chr1 18554444 18556579 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01861 20 319 WRKY Transcription Factor Family AT2G24570 44.073 1.20e-71 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Mepo1g01861 WRKY 9.7e-26 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01861 - - gmx:100170685 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01861 1 18554444 18556579 Mepo1g01861 1 18554444 18556579 ECH
Mepo1g01861 1 18554444 18556579 Mepo5g00699 5 6704330 6706288 PCT