Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01853 ATGTCTCAACCTCAATCTCCTTCCTTTCTCTGTGAAGAACAAACCACCTTCGAAGATGAATCCCTCACCGATTCCGAAACCATTACCAACGACCCATCTCCTACAAAGCTTCAATCTTTATCGATTTTGTTCAACAATGATATGTTTTGGGAAGACGATGAAGTTCTTTCGTTAATCATGAAAGAGAAAGAAACCCATTTGATTAATGATGATTTTGTTATTGATGGATCTTTGAATGAGTCTCGTGTTGAAGGTGTGAATTGGGTTTCTAGAGTTTGTGCTCATTATGGGTTTTCTACTTTGACCACTGTTCTTGCTGTCAACTACTTTGATAGATTCGTTACTAGTTTGAAGTTTCAAAAGGATAAGCCTTGGATGACTCAGCTTACTGCTGTTGCTTGTTTGTCTCTTGCTGCTAAAATGGAAGAAACCCATGTGCCACTTCTTTTGGATTTTCAAGTTGAGGAATCTAGATTTGTGTTTGAAGCTAAAACTATACAAAGAATGGAGCTTTTGGTGTTATCTACATTGAAATGGAGGATGCTTCCAGTGACACCAATTTCATTCTTTGAACACATTGTTAGAAGACTTGGTTTGAAGAGCCGTTTGCATTGGGAGTTTATGTGGCGTTGTGAGAAGGTTCTTCTTCATGTCATTGTTGATTCAAGGGTTATGATGAGTTATCTTCCTTCTACATTGGCTGCTGCTACAATGATCCATGTAATTAAAGAGATTGAACCATTTAATGCAACTGAGTACATTGAACAACTCTTGGGTTTACTAAAGATTAGTGAGGAACAAGTTAATCAGTGCTACAAACTTATGCTGAAGTTATTAGTTTGCGATGATGGCATTTACAGTCTTCACCAGAAACGTAAGCGCGTATCTGAACCAAGTAGTCCGGGTGGTGTCATTGATGCATCTTTCAGTTGTGATAGCTCAAATGATTCATGGACTGCAGCATCGTCGGTTTCGCTTTCACTGCAGCCGATGTTCAAGAGGAGCAGAGCTCAAGACCAGCAGATGCGATTGCCTTCGGTTAATCGCGTGTCTATTGATGTTCTTCATAGCCCTCGTTAA 1080 0.3954 MSQPQSPSFLCEEQTTFEDESLTDSETITNDPSPTKLQSLSILFNNDMFWEDDEVLSLIMKEKETHLINDDFVIDGSLNESRVEGVNWVSRVCAHYGFSTLTTVLAVNYFDRFVTSLKFQKDKPWMTQLTAVACLSLAAKMEETHVPLLLDFQVEESRFVFEAKTIQRMELLVLSTLKWRMLPVTPISFFEHIVRRLGLKSRLHWEFMWRCEKVLLHVIVDSRVMMSYLPSTLAAATMIHVIKEIEPFNATEYIEQLLGLLKISEEQVNQCYKLMLKLLVCDDGIYSLHQKRKRVSEPSSPGGVIDASFSCDSSNDSWTAASSVSLSLQPMFKRSRAQDQQMRLPSVNRVSIDVLHSPR 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01853 359 Gene3D - 78 182 - -
Mepo1g01853 359 MobiDBLite consensus disorder prediction 1 32 - -
Mepo1g01853 359 SUPERFAMILY Cyclin-like 49 181 IPR036915 -
Mepo1g01853 359 FunFam CYCLIN D32 183 273 - -
Mepo1g01853 359 Gene3D - 183 273 - -
Mepo1g01853 359 SUPERFAMILY Cyclin-like 185 287 IPR036915 -
Mepo1g01853 359 FunFam D3-type cyclin 75 182 - -
Mepo1g01853 359 Pfam Cyclin, N-terminal domain 60 181 IPR006671 -
Mepo1g01853 359 Pfam Cyclin, C-terminal domain 184 280 IPR004367 -
Mepo1g01853 359 SMART Cyclin_C_2 184 313 IPR004367 -
Mepo1g01853 359 PANTHER CYCLINS 49 280 IPR039361 -
Mepo1g01853 359 CDD CYCLIN_AtCycD-like_rpt2 184 275 - -
Mepo1g01853 359 CDD CYCLIN_AtCycD-like_rpt1 82 179 - -
Mepo1g01853 359 SMART cyclin_7 87 175 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01853 Mepo-Chr1 18473701 18475709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01853 11 349 Core Cell Cycle Gene Families AT5G67260 51.429 9.72e-109 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01853 K14505 - gmx:100785030 545.428
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo3g07163 3 85310130 85312080 Mepo1g01853 1 18473701 18475709 ECH
Mepo1g01853 1 18473701 18475709 Mepo1g01853 1 18473701 18475709 ECH