Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01852 ATGAAATTGAAAACACTTTCTCTTCTTCTCACACTCCTATCTTTAACCCTAACCCTAAACCAATGTTTTTCACTTACTAACGACGGTGTTTTGTTACTTTCTTTCAAATATGCTGTTCTTAACGACCCTTTATTAGTGCTCTCAAATTGGAATTACAGCGACCAAACACCATGTTCATGGAACGGTGTTTCTTGTTCCATAATAACACCAAACACAAGAAATGATACACCTTTTCGTGTTACTGGTTTATCACTACCGAATTCTCAACTTGTTAGTTCAATTCCTTCTGATCTTGGTACCATTGAACACCTTCAAATTCTTGATCTTTCTAACAATTCCATTAACGGGTCTCTTTCTTCGAACTTTTTTCAACCAAATTCTGAGCTTCGTTTTCTAAATTTTTCGAACAATTTGTTAACTGGGGAAGTTCCAGAGTCATTAACAGAGCTTAGAAATCTTCAGTTTCTTAACTTTTCCGACAATGCTTTCACCGGAAAATTACCCAACAACCTTTCCAACATGCAAAACTTAACTGTAGCTTCGTTTAAGAACAATTACTTCACTGGTTTTCTACCTAAAGATTTGCGAAATTTACAAGTTTTGGATCTGTCTTCAAATTTGTTGAACGGGTCATTAACTCAAGATTTTGGTGGTGATTCCTTGCGTTACTTGAATGTTTCTTACAACAGATTTTCCGGTAAAATTCCACCGGAATTCGCCGAGAAAATTCCGAGTAACGCAACTGTTGATCTATCTTTCAACAATCTCACTGGTGAAATACCAGAGTCCCCTGTTTTGTTGAACCAAGAAACAAAAGTGTTTTCTGGTAATAGTGATCTATGTGGTGAACCAATGAAAAATCCTTGTTCTATTCCTTCTTCACCTTCTTCTGATCCACAAGGTTCTTCTCCAACTTCTCCTCCTGCAATAGCTGCAATGCCGAAGACTTTTGATAATGATTCTCCTCAATCACAAAAAACAGAGTCTTCAGAGAAGAAACAGAGTGGTTTGAGAAAAGGAACTATTATAGGAATTGTTATTGGTGATTTCGTTGGAATTGGAATCTTGGCGATGGTTTTTGTTTACGTTTACAAGTTGAAAAGGAAAAAAGATGCGGAAAATGCAATAAAAGATGAAGCTGCTACTGTAAGAAGTGAGAATTCTTCATCAACCTTTGAGACAAAAGGGTTTACAAGTTGGTCTTGTTTGAGAAAAAGAACAGAAGATGAAGAATCTTCGGAGACACAAAGTTCTTCAGAAAGTGACGTGGAAACATCGCAAAAAAATGTTGATGGTGTTGAGAATCAAAAGCAAGGTGAGAACAAAACTGGTTCTGGTACGGGCACTCTGGTTATAGTTGATGGTGAAAGAGAGCTTGAAGTAGAAACACTTTTGAAAGCTTCTGCTTATATTTTAGGAGCTACTGGTTCAAGTATAATGTATAAAGCTGTTCTTGAAGATGGAACTTCTTTAGCAGTTCGTAGAATTGGTGAAAATGGTGTTGAAAGGTTCAAGGATTTTGAGAATCAAGTTCGGGTTATAGCTAAATTAGTTCATCCAAATTTAGTTAGGGTTCGTGGTTTTTACTGGGGACATGATGAAAAACTCATTATCTATGATTTTGTTCCTAATGGTTGTCTTGCCAACGTTCGTTACAGGAAAGTGGGGTCCTCACCTAGCCACTTACCGTGGGAAATACGGCTCAAGATAGCAAAAGGTGTGGCACGTGGGCTTACTTATCTCCACGAGAAGAAGCACGTGCATGGAAACTTGAAGCCTACCAATATTCTATTGGGCAATGATATGGAGCCCAAAATTGGAGACTTTGGGCTTGAAAGAATTGTAACAGGTGACACAAGTTATAGCAAAGCAGGAGGTTCAGCACGTATTTTTGGAAGTAAAAGATCATCAGCCTCACGTGATAGTTTTCAAGATGTTACATGTGGGCCTAGCCCAAGCCCAAGCCCAAGTTCCATAGGTGGTGTGTCACCTTATCATGCTCCTGAATCACTTAGGAATTTGAAACCTCACCCAAAATGGGATGTTTACTCTTTTGGGGTCATGTTTCTTGAACTATTAACGGGAAAGATAGTGGTTTTGGATGATATGGGCCAAGGCCCAGCGGTTTTGGTTGAGGACAAGAATCGGGCCTTGAGGATGGTTGACGTGGCGATCCGTGCTGACATGGAAGGTAAGGAGGATGCCTTGTTGGCTTTTTTTAAGTTAGGGTATAGTTGTGTGACTAATGTACCTCAAAAAAGGCCACAAATGAAAGAGGTGTTACAAGTACTTGAAAAAACACCATCTACGATTTCTTCATCGTATTATTATAGCCATTGA 2340 0.3872 MKLKTLSLLLTLLSLTLTLNQCFSLTNDGVLLLSFKYAVLNDPLLVLSNWNYSDQTPCSWNGVSCSIITPNTRNDTPFRVTGLSLPNSQLVSSIPSDLGTIEHLQILDLSNNSINGSLSSNFFQPNSELRFLNFSNNLLTGEVPESLTELRNLQFLNFSDNAFTGKLPNNLSNMQNLTVASFKNNYFTGFLPKDLRNLQVLDLSSNLLNGSLTQDFGGDSLRYLNVSYNRFSGKIPPEFAEKIPSNATVDLSFNNLTGEIPESPVLLNQETKVFSGNSDLCGEPMKNPCSIPSSPSSDPQGSSPTSPPAIAAMPKTFDNDSPQSQKTESSEKKQSGLRKGTIIGIVIGDFVGIGILAMVFVYVYKLKRKKDAENAIKDEAATVRSENSSSTFETKGFTSWSCLRKRTEDEESSETQSSSESDVETSQKNVDGVENQKQGENKTGSGTGTLVIVDGERELEVETLLKASAYILGATGSSIMYKAVLEDGTSLAVRRIGENGVERFKDFENQVRVIAKLVHPNLVRVRGFYWGHDEKLIIYDFVPNGCLANVRYRKVGSSPSHLPWEIRLKIAKGVARGLTYLHEKKHVHGNLKPTNILLGNDMEPKIGDFGLERIVTGDTSYSKAGGSARIFGSKRSSASRDSFQDVTCGPSPSPSPSSIGGVSPYHAPESLRNLKPHPKWDVYSFGVMFLELLTGKIVVLDDMGQGPAVLVEDKNRALRMVDVAIRADMEGKEDALLAFFKLGYSCVTNVPQKRPQMKEVLQVLEKTPSTISSSYYYSH 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01852 779 CDD STKc_IRAK 472 766 - -
Mepo1g01852 779 Gene3D Transferase(Phosphotransferase) domain 1 543 775 - -
Mepo1g01852 779 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Mepo1g01852 779 Gene3D Ribonuclease Inhibitor 26 193 IPR032675 -
Mepo1g01852 779 Gene3D Phosphorylase Kinase; domain 1 435 541 - -
Mepo1g01852 779 ProSiteProfiles Protein kinase domain profile. 466 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01852 779 FunFam Os07g0541700 protein 547 632 - -
Mepo1g01852 779 MobiDBLite consensus disorder prediction 284 335 - -
Mepo1g01852 779 Pfam Leucine Rich Repeat 220 239 IPR001611 GO:0005515
Mepo1g01852 779 Pfam Leucine Rich Repeat 103 124 IPR001611 GO:0005515
Mepo1g01852 779 PRINTS Leucine-rich repeat signature 195 208 - -
Mepo1g01852 779 PRINTS Leucine-rich repeat signature 104 117 - -
Mepo1g01852 779 MobiDBLite consensus disorder prediction 403 447 - -
Mepo1g01852 779 PANTHER OS05G0588300 PROTEIN 184 769 - -
Mepo1g01852 779 SUPERFAMILY Protein kinase-like (PK-like) 471 768 IPR011009 -
Mepo1g01852 779 MobiDBLite consensus disorder prediction 632 664 - -
Mepo1g01852 779 Pfam Protein kinase domain 472 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01852 779 MobiDBLite consensus disorder prediction 418 447 - -
Mepo1g01852 779 FunFam Nuclear pore complex protein NUP107 26 193 - -
Mepo1g01852 779 Gene3D Ribonuclease Inhibitor 194 291 IPR032675 -
Mepo1g01852 779 SMART LRR_typ_2 101 125 IPR003591 -
Mepo1g01852 779 SMART LRR_typ_2 195 218 IPR003591 -
Mepo1g01852 779 SMART LRR_typ_2 150 174 IPR003591 -
Mepo1g01852 779 FunFam Leucine-rich repeat receptor-like protein kinase 197 291 - -
Mepo1g01852 779 MobiDBLite consensus disorder prediction 289 309 - -
Mepo1g01852 779 MobiDBLite consensus disorder prediction 632 660 - -
Mepo1g01852 779 SUPERFAMILY L domain-like 26 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01852 Mepo-Chr1 18451917 18455776 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01852 1 779 Receptor kinase-like Gene Family AT4G37250 57.018 0.0 844
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mepo1g01852 Pkinase 3.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01852 - - gmx:100784503 1072.38