Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01842 ATGATGGAAAATGGGACACTTAGAGAGAATTTGTACAATCCAAATTTGTCTCGTTTGACTTGGAAGCAGAGGCTTGAGATTTGTATTGGTGCTGCTAGAGGTCTTCATTACCTTCACAAAGGAGTAGCCGGTGGAATAATCCACCGTGATGTGAAATCCACTAATATATTGCTTGACGAGAATCTTGTAGCTAAAGTTGCTGATTTTGGTCTTTCAAGGACAGGTCCTCTTGATGACCATTCTTATGTCAGCACATGTGTTAAAGGAACTTTTGGGTATCTTGATCCTGATTACTTTAGATCACAACAGCTTACAGAAAAATCTGATGTTTATTCTTTTGGGGTGGTTCTACTTGAACTGTTGTGCGCAAGACCAGCCATCGAACTGTCTTGTCCAAGTGAGCAAGTCAATTTGGCTGAGTGGGGATTGCATTGCAAAGACAAAGGGATACTTGAAGAGATCGTTGATCTTTCCATCAAGGCACAAATTATTCAAAACTCACTTAGAATATTTAGTGAGACTGTAGAAAAATGCTTACACGATTATGGTTGCGATAGGCCAACAATGGTTGATGTGTTGTGGGACTTGGAATATGCTTTGCAGCTTCAGAGAGAACCGCATGAGGATAGTTCTAGCAGTGCTTTTGCATCACTTCAATTGCCTAATGTTCAGCGTCTACCTTCTCTGTCTACACTGACTGAAGCGGATGGCACATCTACTGGGAGGGTAGATGAATCAGAAAATGCAGCATTGATGATGCTAGATAAATTTTCATGCAAAGCAAATCAAGGTATAACAATCAACGCGCAAGTGTCTCCGTGA 822 0.41 MMENGTLRENLYNPNLSRLTWKQRLEICIGAARGLHYLHKGVAGGIIHRDVKSTNILLDENLVAKVADFGLSRTGPLDDHSYVSTCVKGTFGYLDPDYFRSQQLTEKSDVYSFGVVLLELLCARPAIELSCPSEQVNLAEWGLHCKDKGILEEIVDLSIKAQIIQNSLRIFSETVEKCLHDYGCDRPTMVDVLWDLEYALQLQREPHEDSSSSAFASLQLPNVQRLPSLSTLTEADGTSTGRVDESENAALMMLDKFSCKANQGITINAQVSP 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01842 273 Pfam Protein tyrosine and serine/threonine kinase 1 190 IPR001245 GO:0004672|GO:0006468
Mepo1g01842 273 SUPERFAMILY Protein kinase-like (PK-like) 2 197 IPR011009 -
Mepo1g01842 273 PANTHER OS07G0166700 PROTEIN 2 203 IPR045272 GO:0004714|GO:0006468
Mepo1g01842 273 Gene3D Transferase(Phosphotransferase) domain 1 2 219 - -
Mepo1g01842 273 ProSitePatterns Serine/Threonine protein kinases active-site signature. 46 58 IPR008271 GO:0004672|GO:0006468
Mepo1g01842 273 FunFam Receptor-like protein kinase FERONIA 2 217 - -
Mepo1g01842 273 ProSiteProfiles Protein kinase domain profile. 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01842 273 SMART serkin_6 1 199 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01842 Mepo-Chr1 18344557 18345901 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01842 2 246 Receptor kinase-like Gene Family AT3G46290 60.800 1.50e-98 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Mepo1g01842 PK_Tyr_Ser-Thr 2.1e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01842 - - cam:101496146 391.349