Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01834 ATGACCTTCTTTAAGGAGAGCAGTGACAATGAGAAAGCCTCAATCAATAAACAAAATCTTGATGATGATGAATCACAACATAGTATAGGAGAATGGTTGAGTTTAGGAACCAAAGGAAACATGCCTCTAAACCAAGATTCTCAATCATCAAAACCTCTTCACAACAAAAAGACATACTCATGCAACTTCTGCATGAGAAAGTTTTACAATTCACAAGCCTTAGGGGGTCACCAAAATGCACACAAAAGGGAAAGAGAAGCAGCTAGAAGTTACCAATTATCTCAAAATTCATTGGCAGCTCGGTCACTAGGAATCCAGCCTCATTCTCTTGTGCACAAGCCAAACAGAGAAAGAGCTGCTACTATGGTGGAAGCTCGATTAAATAATGATGCCAATCCTTTTATTGGAATGACATTGACACCCCATGTATGGCATGGAAGCTTTCGAATGCAAGAATCAGATAAACATAAGCTTAACTTAGATCTTCGGCTTTGA 495 0.3899 MTFFKESSDNEKASINKQNLDDDESQHSIGEWLSLGTKGNMPLNQDSQSSKPLHNKKTYSCNFCMRKFYNSQALGGHQNAHKREREAARSYQLSQNSLAARSLGIQPHSLVHKPNRERAATMVEARLNNDANPFIGMTLTPHVWHGSFRMQESDKHKLNLDLRL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01834 164 ProSitePatterns Zinc finger C2H2 type domain signature. 61 81 IPR013087 -
Mepo1g01834 164 MobiDBLite consensus disorder prediction 30 54 - -
Mepo1g01834 164 MobiDBLite consensus disorder prediction 1 54 - -
Mepo1g01834 164 MobiDBLite consensus disorder prediction 10 28 - -
Mepo1g01834 164 Gene3D Classic Zinc Finger 40 109 - -
Mepo1g01834 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 59 86 IPR013087 -
Mepo1g01834 164 SUPERFAMILY beta-beta-alpha zinc fingers 55 86 IPR036236 -
Mepo1g01834 164 PANTHER ZINC FINGER PROTEIN 4-LIKE 10 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01834 Mepo-Chr1 18239584 18240078 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01834 18 112 C2H2 Transcription Factor Family AT1G24625 44.762 8.23e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01834 - - ccaj:109809498 167.162
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01834 1 18239584 18240078 Mepo1g01834 1 18239584 18240078 ECH