Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01833 ATGTATCCAAATTCACAAGAGCAATCACAACCACTGATAGTGGAAGAACAAGAAGAAGAAAAGCCACAAGAAACAGCATATGATTCATCAGAAAAGATAGTAATCGTTGGAATAGACGAATCCACAAACTGGGGTACCTCAGTTCCACCATTTTCATGGAAGAAGCTATGGCTATTCACAGGACCTGGTTTTCTAATGAGTATAGCGTTTTTGGATCCAGGGAACTTAGAAGGAGACCTACAAGCTGGTGCCATTGCAGGGTATTCTTTGTTATGGCTTCTTATGTGGGCCACAGCTATGGGACTTTTGATTCAGCTTTTGTCAGCAAGGCTTGGTGTGGCTACAGGGAAGCATTTGGCTGAGCTTTGTAGGGAGGAGTATCCTAGATGGGCTAGGTATGTGCTTTGGGTTATGGCTGAGTTTGCTCTTATCGGTTCTGATATACAAGAGGTTATTGGTAGTGCTATTGCTATTAGGATTCTTAGTAATGGAGTTATTCCTCTTTGGGCTGGTGTTGTCATTACTGCTCTTGATTGTTTTATTTTTCTCTTTCTTGAGAACTATGGTGTGAGGACATTGGAGGCTTTTTTTGCTGTTCTCATTGGTGTAATGGCACTTGCTTTTGCATGGATGTTTGGTGAGGCTAAGCCAAGTGGCAAGGAACTTCTAGTTGGCATTTTGGTTCCAAAACTCAGCTCGAGAACTATACAGCAAGCTGTCGGAGTTGTGGGATGTCTTATAATGCCTCACAATGTATTCTTGCATTCGGCTCTTGTTCAGTCAAGGCAAGTTGATCACAGCAACAAAGGCCGAGTTCAAGAAGCGCTTAACTATTACTCAATAGAGTCAACAATTGCCTTGATAGTCTCCTTTATCATTAACATATTCGTCACAGCTGTGTTTGCAAAGGGGTTTTATGGTTCCGAAATAGCAAATAAAATAGGCCTTGAAAATGCAGGACAGTATCTTCAGGAGACATATGGAGGTGGAGTTTTTCCGATATTGTATATATGGGGTATTGGGTTGTTAGCAGCTGGTCAAAGTAGCACTATAACTGGTACCTACGCAGGACAATTTATCATGGGAGGTTTTCTTAATTTAAGGTTGAAGAAATGGATGAGGGCGTTGATTACCCGTAGTTTTGCAATAGTCCCAACCATGATAGTTGCGCTTATGTTTGATGCTACTGAGGACTCACTAGATGTACTGAATGAGTGGCTTAATGTACTTCAGTCGGTTCAAATTCCCTTTGCTCTTATTCCTTTGCTTTGTCTCGTGTCGAAGGAGCAGATAATGGGCACTTTCAAAATTGGCCCTGTCCTCAAGATTTTTTCGTGGAGTGTGGCTGCTCTTGTGACAGTGATTAACGGCTATCTGTTGTTGGAATTCTTCTCAGCTGAAGTGAATGGAATAATAGTTGGAGCTGTAGTATGTGCAATAACTGCTGCATATGTTGCATTCATAATATATCTTATTCTGCGGGCGACTACATTTTCGCCTTGGCAAAGCGTAACACGACCAAAGGCAATACTTAGTTGA 1539 0.4172 MYPNSQEQSQPLIVEEQEEEKPQETAYDSSEKIVIVGIDESTNWGTSVPPFSWKKLWLFTGPGFLMSIAFLDPGNLEGDLQAGAIAGYSLLWLLMWATAMGLLIQLLSARLGVATGKHLAELCREEYPRWARYVLWVMAEFALIGSDIQEVIGSAIAIRILSNGVIPLWAGVVITALDCFIFLFLENYGVRTLEAFFAVLIGVMALAFAWMFGEAKPSGKELLVGILVPKLSSRTIQQAVGVVGCLIMPHNVFLHSALVQSRQVDHSNKGRVQEALNYYSIESTIALIVSFIINIFVTAVFAKGFYGSEIANKIGLENAGQYLQETYGGGVFPILYIWGIGLLAAGQSSTITGTYAGQFIMGGFLNLRLKKWMRALITRSFAIVPTMIVALMFDATEDSLDVLNEWLNVLQSVQIPFALIPLLCLVSKEQIMGTFKIGPVLKIFSWSVAALVTVINGYLLLEFFSAEVNGIIVGAVVCAITAAYVAFIIYLILRATTFSPWQSVTRPKAILS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01833 512 Pfam Natural resistance-associated macrophage protein 77 438 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo1g01833 512 NCBIfam Nramp family divalent metal transporter 61 430 - -
Mepo1g01833 512 MobiDBLite consensus disorder prediction 1 27 - -
Mepo1g01833 512 PRINTS Natural resistance-associated macrophage protein signature 346 365 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo1g01833 512 PRINTS Natural resistance-associated macrophage protein signature 408 427 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo1g01833 512 PRINTS Natural resistance-associated macrophage protein signature 239 262 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo1g01833 512 PRINTS Natural resistance-associated macrophage protein signature 165 184 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo1g01833 512 PRINTS Natural resistance-associated macrophage protein signature 374 391 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo1g01833 512 PRINTS Natural resistance-associated macrophage protein signature 190 211 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo1g01833 512 PRINTS Natural resistance-associated macrophage protein signature 135 161 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo1g01833 512 Hamap Divalent metal cation transporter MntH [mntH]. 41 464 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo1g01833 512 PANTHER SOLUTE CARRIER PROTEIN FAMILY 11 MEMBER 32 495 IPR001046 GO:0016020|GO:0030001|GO:0046873
Mepo1g01833 512 NCBIfam metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 54 432 IPR001046 GO:0016020|GO:0030001|GO:0046873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01833 Mepo-Chr1 18225305 18228905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01833 49 501 Inorganic Solute Cotransporters AT2G23150 81.898 0.0 769
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01833 K21398 - gmx:100812381 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01833 1 18225305 18228905 Mepo1g01833 1 18225305 18228905 ECH
Mepo5g00674 5 6475195 6480514 Mepo1g01833 1 18225305 18228905 PCT