Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01815 ATGAGTTGCAATGGGTGCCGAGTTCTTCGAAAGGGTTGCAGTGAGTCATGTATTTTACGACCTTGTTTGCAATGGATCGAAACACCAGAAGCTCAAGGCCACGCTACTGTTTTCGTAGCCAAATTCTTTGGTCGAGCTGGTCTCATGTCTTTCATTTCCAACGTCCCTGAACCACAGAGACCAGCTCTGTTTCAGTCTCTACTGTTTGAAGCGTGTGGGAGAACGGTTAACCCTGTGAACGGTGCTGTGGGGCTTTTGTGGACTGGAAACTGGCACGTGTGTCAAGCAGCGGTTGAGACGGTTCTTCGTGGTGGCACGCTTAGGCCTTTACCGGAGCTGACACTTCTGGACGCGCCTCTCACTGCCACCGATGAAGCTTCTGAGGCGGAAGACGATGGTGCTGATGCTATGTGGAAGATTCGAGATCCGAATTTCGGGTTGGCGAGCTCACAATCTAGTAACAAGGTGTATTCTGGAAGCAAACGGAGGAGATCAGAGGAGTTTGTGAAGGTACCAGCGGCGATTAATCTTGATTTACGATTGACGCCGATTTTTCAACAGAAGGCGGTAGAGGAACGCCGGCCTGGTTCTCCGTCGATGACGTCCGAGGAATCGGTGACGACGACGGCGTGTTTGGAGACTGGGATTGGAGATCGGTGGAGTCACGGTGGTGATCGGAAAGTTCTCAACCTTTTCATATGA 702 0.5128 MSCNGCRVLRKGCSESCILRPCLQWIETPEAQGHATVFVAKFFGRAGLMSFISNVPEPQRPALFQSLLFEACGRTVNPVNGAVGLLWTGNWHVCQAAVETVLRGGTLRPLPELTLLDAPLTATDEASEAEDDGADAMWKIRDPNFGLASSQSSNKVYSGSKRRRSEEFVKVPAAINLDLRLTPIFQQKAVEERRPGSPSMTSEESVTTTACLETGIGDRWSHGGDRKVLNLFI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01815 233 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
Mepo1g01815 233 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 213 - -
Mepo1g01815 233 Pfam Lateral organ boundaries (LOB) domain 2 101 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01815 Mepo-Chr1 18012538 18013748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01815 1 232 AS2 family AT3G49940 57.143 5.05e-84 248
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Mepo1g01815 LOB 8.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01815 - - gmx:100816189 327.02
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00656 5 6239797 6241127 Mepo1g01815 1 18012538 18013748 ECH
Mepo1g01815 1 18012538 18013748 Mepo1g01815 1 18012538 18013748 ECH
Mepo1g01815 1 18012538 18013748 Mepo5g00656 5 6239797 6241127 PCT