Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01809 ATGGCCGTAAAACAATTGCAATTGCAATTCAACTTGTTGTCGCGCGATAGATTGGTGTTTCTCTTTCGAACATCTCAATCTCATTCTTTTTTTCCTTATAATAATAATAAATTCCCCGAATCTTTTCTCTCTTTCTTCCTTCGCTCTTCCTCAACAACTCCGTCACCGCCGAACAACCATCTCCGCCGTCCGCGGCCTCCTCCTCCTCCTCCACCCGTCGACATGGCGCAGAAATTCGGAAAATCCACTCGCCGCCCCGGCGCTGCATCCAAAGCTAGGGTTTATGCTGATGTCAACGTCGTTCGTCCTAAGGAATATTGGGATTACGAAACCCTCACCGTTCAGTGGGGGGAGCAAGATGATTATGAGGTGGTGAGGAAAGTCGGAAGGGGAAAATACAGTGAGGTGTTTGAAGGTGTTCATTGTACTGATAATGAAAAATGTGTTATTAAGATCCTCAAACCTGTCAAGAAGAAGAAGATCAAGAGGGAAATCAAAATATTACAGAATCTTTGTGGAGGGCCGAATATTGTAAAGTTGCTTGACATTGTTAGAGACCAGCAGTCGAAGACCCCTAGTCTCATATTTGAATATGTCAATAACACTGATTTTAAAGTACTCTATCCTACACTGTCAGACTATGATATAAGATATTATATCTATGAACTTCTGAAGGCATTGGATTATTGCCATTCACAAGGGATCATGCATCGGGATGTGAAGCCACATAATGTAATGATTGACCATGAGCAGCGTAAGCTTCGCCTTATAGATTGGGGGCTTGCAGAATTCTATCATCCTGGGAAGGAATATAATGTCCGCGTGGCTTCAAGATATTTCAAAGGCCCAGAGCTTCTTGTTGATCTTCAAGACTATGATTACTCTCTAGATTTGTGGAGTCTTGGTTGTATGTTTGCCGGGATGATATTCCGGAAGGAGCCGTTCTTTTATGGGCACGATAACTATGATCAACTGGTCAAGATAGCCAGGGTACTTGGGACGGACGAATTAAATGCATATTTGAACAAGTATCGCATTGAGTTGGACCCACATTTTGCAGCACTTATTGGGAGGCATAGCAGGAAGCCATGGCAAAGGTTCATTAATGTTGAAAATCAACACTTGACTGTTCCTGAGGCTGTTGACTTTGTTGACAAGTTACTGCGATACGATCACCAAGAACGGCCCACTGCAAAAGAAGCTATGGCCCATCCATACTTCAATCCAATTAGAAATGCGGAAAGTAGCAGAGCTCGTGCACATTGA 1266 0.4329 MAVKQLQLQFNLLSRDRLVFLFRTSQSHSFFPYNNNKFPESFLSFFLRSSSTTPSPPNNHLRRPRPPPPPPPVDMAQKFGKSTRRPGAASKARVYADVNVVRPKEYWDYETLTVQWGEQDDYEVVRKVGRGKYSEVFEGVHCTDNEKCVIKILKPVKKKKIKREIKILQNLCGGPNIVKLLDIVRDQQSKTPSLIFEYVNNTDFKVLYPTLSDYDIRYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHEQRKLRLIDWGLAEFYHPGKEYNVRVASRYFKGPELLVDLQDYDYSLDLWSLGCMFAGMIFRKEPFFYGHDNYDQLVKIARVLGTDELNAYLNKYRIELDPHFAALIGRHSRKPWQRFINVENQHLTVPEAVDFVDKLLRYDHQERPTAKEAMAHPYFNPIRNAESSRARAH 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01809 421 FunFam Casein kinase II subunit alpha 199 410 - -
Mepo1g01809 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 235 247 IPR008271 GO:0004672|GO:0006468
Mepo1g01809 421 ProSiteProfiles Protein kinase domain profile. 122 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01809 421 PANTHER CASEIN KINASE II SUBUNIT ALPHA 84 416 IPR045216 GO:0004674|GO:0006468
Mepo1g01809 421 Pfam Protein kinase domain 122 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01809 421 ProSitePatterns Protein kinases ATP-binding region signature. 128 151 IPR017441 GO:0005524
Mepo1g01809 421 FunFam Casein kinase II subunit alpha 108 198 - -
Mepo1g01809 421 MobiDBLite consensus disorder prediction 53 88 - -
Mepo1g01809 421 CDD STKc_CK2_alpha 103 407 IPR045216 GO:0004674|GO:0006468
Mepo1g01809 421 MobiDBLite consensus disorder prediction 59 75 - -
Mepo1g01809 421 SUPERFAMILY Protein kinase-like (PK-like) 95 411 IPR011009 -
Mepo1g01809 421 Gene3D Phosphorylase Kinase; domain 1 122 198 - -
Mepo1g01809 421 SMART serkin_6 122 407 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01809 421 Gene3D Transferase(Phosphotransferase) domain 1 199 407 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01809 Mepo-Chr1 17955041 17961945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01809 120 410 Core Cell Cycle Gene Families AT3G48750 32.237 7.61e-42 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CK2 Mepo1g01809 Pkinase 1.3e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01809 K03097 - gmx:100776388 687.567
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01809 1 17955041 17961945 Mepo1g01809 1 17955041 17961945 ECH