Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01798 ATGGATACGCTGTTTAGGCTTGTCAATTTTCAACAACAATATCAACCTGATCCATCTTCCCTCAACTCCACCACCACCTTAACAACTTCTAGCAGCTCTAGATCCTCAAGACAAACAACATATCAATATTACAACCAACAAGAAGAAGACGAAGAATGCTTCAACAACTTTTATTACATGGATCATAATAACAACAATGATGAAGATTTATCCTCATCTTCTTCTAAACAACACTATTATACTTATCCTTATGCATCCACTACTACTATCACTACTCCAAACACAAACACTACTTATAATACTATCAACACCCCCACCACAACTGATAATTACTCTTTCTTACCCTCCCATGATTACTACAACTTTGAATTCTCCGGTAACTCATGGTCACAAAACATCCTCCTTGAAACTGCACGTGCATTTTCCGACAACAATACAAACCGAATCCAACAACTCATGTGGATGCTAAACGAGCTTAGTTCCCCATACGGTGACACAGATCAAAAACTTTCATCTTATTTTCTTCAAGCTTTGTTTAGTCGCATGAACGACGCGGGAGATAGAACCTACAAAACCTTAACATCCGCGTCGGAAAAAACATGTTCCTTCGATTCAACGAGGAAGATGTTGTTGAAGTTCCAAGAAGTTAGTCCATGGACAACGTTTGGACACGTGGCAGCCAACGGTGCTATCTTAGAAGCATTAGAAGGTAACCCTAAACTTCACATAATTGATATTAGCAACACTTATTGCACTCAATGGCCAACACTCCTCGAAGCGTTGGCCACCCGCTCCGATGATACGCCTCACCTCCGTTTAACCACTGTAGTCACCACAGTCAGCGGTGGCTCAGTGCAAAAAGTCATGAAGGAAATTGGTTCAAGGATGGAAAAATTCGCTAGGCTCATGGGAGTGCCGTTCAAATTCAAAATCATTTTCAGTGATTTAAGAGAGTTGAATTTGTGTGATTTAGATATTAAAGAAGATGAAGCTTTGGCTATAAATTGTGTAAACTCTTTACATTCGATATCTGGAGCCGGAAACCACCGTGATTTGTTTATATCTTTGCTTCGTGGGTTAGAACCTAGGGTTTTAACTATTGTTGAAGAAGAAGCTGATTTAGAAGTTTGTTTTGGTTCGGATTTCGTGGAAGGTTTTAAAGAGTGTTTAAGATGGTTTAGGGTTTATTTTGAAGCACTTGATGAAAGTTTTTCAAGAACAAGTAGTGAGAGGTTGATGCTAGAAAGAGAAGCTGGAAGAGGTATTGTTGATTTGGTTGCTTGTGATCCTTATGAGTCAGTGGAGAGACGTGAAACAGCGTCACGGTGGAGGAGGAGGTTGCATGGTGGTGGGTTTAATACGGTGTCGTTTAGTGATGAAGTTTGTGATGATGTTAGGGCTTTGTTGAGAAGGTATAAAGAAGGGTGGTCGATGACATCCTCCGATGGTGATACTGGAATATTCTTGTCGTGGAAGGATAAGCCGGTGGTGTGGGCCAGTGTATGGAGGCCTTGA 1515 0.4073 MDTLFRLVNFQQQYQPDPSSLNSTTTLTTSSSSRSSRQTTYQYYNQQEEDEECFNNFYYMDHNNNNDEDLSSSSSKQHYYTYPYASTTTITTPNTNTTYNTINTPTTTDNYSFLPSHDYYNFEFSGNSWSQNILLETARAFSDNNTNRIQQLMWMLNELSSPYGDTDQKLSSYFLQALFSRMNDAGDRTYKTLTSASEKTCSFDSTRKMLLKFQEVSPWTTFGHVAANGAILEALEGNPKLHIIDISNTYCTQWPTLLEALATRSDDTPHLRLTTVVTTVSGGSVQKVMKEIGSRMEKFARLMGVPFKFKIIFSDLRELNLCDLDIKEDEALAINCVNSLHSISGAGNHRDLFISLLRGLEPRVLTIVEEEADLEVCFGSDFVEGFKECLRWFRVYFEALDESFSRTSSERLMLEREAGRGIVDLVACDPYESVERRETASRWRRRLHGGGFNTVSFSDEVCDDVRALLRRYKEGWSMTSSDGDTGIFLSWKDKPVVWASVWRP 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01798 504 ProSiteProfiles GRAS family profile. 121 503 IPR005202 -
Mepo1g01798 504 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 109 496 IPR005202 -
Mepo1g01798 504 Pfam GRAS domain family 132 503 IPR005202 -
Mepo1g01798 504 MobiDBLite consensus disorder prediction 15 41 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01798 Mepo-Chr1 17846464 17848261 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01798 1 504 GRAS Transcription Factor Family AT4G37650 56.015 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Mepo1g01798 GRAS 1.1e-105 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01798 - - tpra:123919748 779.245
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01798 1 17846464 17848261 Mepo1g01798 1 17846464 17848261 ECH
Mepo5g00638 5 6009892 6011561 Mepo1g01798 1 17846464 17848261 PCT