Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01768 ATGTTACTTGTTCCTAACATCTTCAACTTTGGCCTTATCAGAAAAAGCAGTGGATTCTCAAGAGGGGCTTCCATGTACAGAGGAGTTACAAGACACCATCAACATGGAAGATGGCAAGCTAGAATTGGTAGAGTAGCTGGTAATAAAGATCTATATCTTGGAACATTCAGTACTCAAGAGGAAGCAGCTGAAGCCTATGACATTGCAGCTATAAAATTTAGAGGAGCTAATGCAGTGACCAACTTTGATATAATAAAATATGATGTTGAAAAAATCATGGCTAGTAGTAACCTTCTTAACATTGAACAAGCTAGAAGGAACAAAGAGGTGGTAGATATTAGTACAAATCAGTACATTGATCAGAACAAGCCTTCTTCTGCATATGACAACAATATCACTCAAGAAGCCATTTCAATGCAGAAGAATATGGCTATGTATCAATCCTCCCAACATCAACAACTTCAACAGAATCAACCAAGATTTGAGAATGAAAGAACTCGTCAAACTTTTTCCTCAGTGTCTTTGGATAACATGTTTCATCAAGAAGTTGTTGAGGAAGCAAGTAAGATGAGAACACATGTGTCAAATGCTTCTTCATTGGCTACAAGTTTGAGTAGTTCAAGAGAAGGCAGTCCAGATAGAACAAGCTTGCAAAATCTCTCTGGAATAATGCCTTCAACAGCTTCAAAACTATTGGTTACTTCTGCTCCAAATAGTAATTTGAATTCTTGGGACCCTTCACAACATCTTAGGCCTTCCCTTTCTTTGCCTCAGATGCCTGTTTTTGCTGCATGGACAGATGCTTAG 807 0.3817 MLLVPNIFNFGLIRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGANAVTNFDIIKYDVEKIMASSNLLNIEQARRNKEVVDISTNQYIDQNKPSSAYDNNITQEAISMQKNMAMYQSSQHQQLQQNQPRFENERTRQTFSSVSLDNMFHQEVVEEASKMRTHVSNASSLATSLSSSREGSPDRTSLQNLSGIMPSTASKLLVTSAPNSNLNSWDPSQHLRPSLSLPQMPVFAAWTDA 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01768 268 SUPERFAMILY DNA-binding domain 24 83 IPR016177 GO:0003677
Mepo1g01768 268 ProSiteProfiles AP2/ERF domain profile. 25 83 IPR001471 GO:0003700|GO:0006355
Mepo1g01768 268 PRINTS Ethylene responsive element binding protein signature 65 85 IPR001471 GO:0003700|GO:0006355
Mepo1g01768 268 PRINTS Ethylene responsive element binding protein signature 26 37 IPR001471 GO:0003700|GO:0006355
Mepo1g01768 268 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 13 171 - -
Mepo1g01768 268 MobiDBLite consensus disorder prediction 190 221 - -
Mepo1g01768 268 CDD AP2 24 84 IPR001471 GO:0003700|GO:0006355
Mepo1g01768 268 MobiDBLite consensus disorder prediction 191 221 - -
Mepo1g01768 268 Pfam AP2 domain 26 75 IPR001471 GO:0003700|GO:0006355
Mepo1g01768 268 Gene3D AP2/ERF domain 25 85 IPR036955 GO:0003700|GO:0006355
Mepo1g01768 268 FunFam AP2-like ethylene-responsive transcription factor 24 85 - -
Mepo1g01768 268 SMART rav1_2 25 89 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01768 Mepo-Chr1 17601761 17603242 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01768 19 90 AP2-EREBP Transcription Factor Family AT4G37750 38.750 1.27e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Mepo1g01768 AP2 2e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01768 K09285 - gmx:100787611 326.25