Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01759 ATGATTACCGGTGATCAACTAGCTATTGGCAAGGAAACCGGTCGCAGGCTCGGCATGGGAAGTAACATGTATCCTTCATCCTCCCTCCTTGGCGAGCACAAGGATGCATCAATTACTTCGCTTCCGGTCGATGAGCTTATTGAGAAGGCTGATGGATTTGCTGGTGTCTTCCCTGAACATAAATATGAGATTGTAAAGAGACTCCAGGATAGGAAACACATAGTTGGGATGACAGGAGATGGTGTGAATGATGCTCCTGCATTGAAAAGAGCATATATTGGAATTGCAGTGGCTGATGCAACTGATGCAGCTCGAGGTGCATCTGACATAGTCCTCACGGAGCCTGGGTTGAGTGTTATTGTGAGTGCAGTTCTCACAAGCAGGGCTATTTTTCAAAGAATGAAGAACTACACGATACACGCAGTTTCCATAACAATCCGAATCGTGCTTGGATTTATGCTCCTTGCTCTAATTTGGAAATTTGATTTCTCTCCTTTTATGGTTTTGATCATTGCCATACTTAATGATGGTACTATCATGACCATTTCGAAGGATAGAGTGAAGCCATCTCCTATGCCAGATTCATGGAAGTTGAAGGAAATTTTTGCCACAGGCATAGTGCTTGGTGCTTACCTTGTTGTTATGATTGTTGTCTTCTTTTGGGTTGCTCATCTGATTTTTTCACGGGAGAGCCATGAAGAACTCACAGCTGCTATTTACCCTCAAGTGAGTATTATTGCCACACTGATAGCTGTGTATGCAAATTGGGAGTTTGCAAGTATGAAAGGAATTGGATGGGGTTGGGCAGGTGTCATTTGGCTCTACAACATTATTTTCTATATCCCTTTGGATGTCCTTAAGTTCGTCATTCGATATACCTTGAGTGGCAATGCATGGAACAATGTTACTGAGAATAGGGGACAACTGAAAAATGGAAAACTTGCTGCTATAAAAGTTCTTTCAACTAAATCAAGACAAAAGGTGAAAGATTTCTTAACAGGGATTAATGTGATCTCTGAAGTAGAGCATGAAAATTTGGTTAAGTTGTTTGGTTGTTGTGTTGAAAGAAATAGCAGGATATTAGTCTACAATTACCTTGAGAATAATAGCCTTCCACAAACTCTTCAAGGTGGAGGTCACAGTAGTATCTACTTTGATTGGCGAACGCGATGTAGAATATGTGTTGGCATTGAACGCAGGCTTGCCTTTCTGCACGAAGAAGTCAGGCCTCCTATCATTCATAGGGATATAAAAGCAAGCAATATTCTCCTTGACAAAGACCTTACACCGAAGATTTCGGATTTTGGTCTTGCAAAGCTTATTCCAGCAAATGCGACTCATATGGATACAATGTATGCATTTTTGCATATGGACAGACTGGGACTTGAATTTGCTGATATAATCTATCATGCAGTAGCTTTTGTGATTTCTGCTAATAGGAGCCACTGA 1449 0.4113 MITGDQLAIGKETGRRLGMGSNMYPSSSLLGEHKDASITSLPVDELIEKADGFAGVFPEHKYEIVKRLQDRKHIVGMTGDGVNDAPALKRAYIGIAVADATDAARGASDIVLTEPGLSVIVSAVLTSRAIFQRMKNYTIHAVSITIRIVLGFMLLALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPMPDSWKLKEIFATGIVLGAYLVVMIVVFFWVAHLIFSRESHEELTAAIYPQVSIIATLIAVYANWEFASMKGIGWGWAGVIWLYNIIFYIPLDVLKFVIRYTLSGNAWNNVTENRGQLKNGKLAAIKVLSTKSRQKVKDFLTGINVISEVEHENLVKLFGCCVERNSRILVYNYLENNSLPQTLQGGGHSSIYFDWRTRCRICVGIERRLAFLHEEVRPPIIHRDIKASNILLDKDLTPKISDFGLAKLIPANATHMDTMYAFLHMDRLGLEFADIIYHAVAFVISANRSH 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01759 482 SMART serkin_6 288 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01759 482 Pfam haloacid dehalogenase-like hydrolase 46 91 - -
Mepo1g01759 482 SUPERFAMILY HAD-like 1 124 IPR036412 -
Mepo1g01759 482 Pfam Protein kinase domain 310 446 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01759 482 SUPERFAMILY Protein kinase-like (PK-like) 306 449 IPR011009 -
Mepo1g01759 482 FunFam Plasma membrane ATPase 1 126 - -
Mepo1g01759 482 PRINTS H+-transporting ATPase (proton pump) signature 109 134 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo1g01759 482 PRINTS H+-transporting ATPase (proton pump) signature 50 66 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo1g01759 482 PRINTS H+-transporting ATPase (proton pump) signature 78 94 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo1g01759 482 NCBIfam HAD-IC family P-type ATPase 53 164 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Mepo1g01759 482 Gene3D Transferase(Phosphotransferase) domain 1 367 457 - -
Mepo1g01759 482 Gene3D - 1 115 IPR023214 -
Mepo1g01759 482 SUPERFAMILY Calcium ATPase, transmembrane domain M 127 294 IPR023298 -
Mepo1g01759 482 PANTHER CALCIUM-TRANSPORTING ATPASE 1 310 - -
Mepo1g01759 482 Gene3D Phosphorylase Kinase; domain 1 304 366 - -
Mepo1g01759 482 Gene3D - 116 253 - -
Mepo1g01759 482 FunFam Os07g0541700 protein 366 454 - -
Mepo1g01759 482 ProSitePatterns Serine/Threonine protein kinases active-site signature. 412 424 IPR008271 GO:0004672|GO:0006468
Mepo1g01759 482 PRINTS P-type cation-transporting ATPase superfamily signature 78 97 - -
Mepo1g01759 482 PRINTS P-type cation-transporting ATPase superfamily signature 101 113 - -
Mepo1g01759 482 ProSiteProfiles Protein kinase domain profile. 258 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01759 Mepo-Chr1 17490599 17495989 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01759 1 313 Primary Pumps ATPases AT1G80660 74.157 2.79e-176 517
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g01759 Pkinase 4.3e-24 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01759 K01535 - gmx:100782329 508.064