Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01758 ATGGGTCTTAATAATCAAGATGCTAGTAACAACTCAGGCCTTCAACTTATTCTAGGCTTAGCTCTTACTCTTACCAAACAAGACACACCACCATCCAACAAGAACGTTACAAAGCCTTATTCCTCAAGTAATCATAACAACTATGAAGCCGAACCATCTTTAACGTTGGGTTTATCCACTAAGAGTTACTATGAAGAACCTCTTGATTTTTCTACACAAACAAATTCACCTCATCACAGCGTTGTTTCCTCTTTCTCTAGTGGAAGGGTGAAGAGAGAAAGAGATGTTAGCAGTGAATTAGAAATGGAAACAACGGAGATGGAGAGAGTTTCTTCGAGAATCAGCGACGAAGATGAAGACGGCGCCACTGCAGCTAGGAAGAAGCTTAGACTTACTAAAGATCAATCTGCTATGCTTGAAGAAAGCTTCAAAGAACACAGCACTCTCAATCCTAAACAGAAGCAAGCTTTAGCCAGAGAGTTAAATCTAACACCTCGACAAGTTGAGGTCTGGTTCCAGAACCGTAGAGCCAGAACAAAGCTGAAGCAAACAGAAGTGGATTGTGAGTTCCTAAAGAAATGTTGTGAAACATTAACAGAAGAGAATAGAAGGCTACAAAAGGAGGTGCAAGAATTAAAGGCACTGAAACTAGCACAACCCTTGTATATGCCTATGCCAGCAGCTACCCTTACTATGTGCCCTTCATGTGAGAGACTAGGTGGTGGTGGTGTTAATGGTGGTTCTTCCAATAAGAGCAATTTCTCTAAGCCTCACTTTTACAACCCCTTCACAAATTCTTCAGCAGCATGTTGA 813 0.4133 MGLNNQDASNNSGLQLILGLALTLTKQDTPPSNKNVTKPYSSSNHNNYEAEPSLTLGLSTKSYYEEPLDFSTQTNSPHHSVVSSFSSGRVKRERDVSSELEMETTEMERVSSRISDEDEDGATAARKKLRLTKDQSAMLEESFKEHSTLNPKQKQALARELNLTPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTEENRRLQKEVQELKALKLAQPLYMPMPAATLTMCPSCERLGGGGVNGGSSNKSNFSKPHFYNPFTNSSAAC 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01758 270 SMART halz 182 225 IPR003106 GO:0006355|GO:0043565
Mepo1g01758 270 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 35 251 - -
Mepo1g01758 270 SMART HOX_1 124 186 IPR001356 GO:0003677
Mepo1g01758 270 CDD homeodomain 126 183 IPR001356 GO:0003677
Mepo1g01758 270 ProSitePatterns 'Homeobox' domain signature. 157 180 IPR017970 GO:0000981|GO:0006355
Mepo1g01758 270 ProSiteProfiles 'Homeobox' domain profile. 122 182 IPR001356 GO:0003677
Mepo1g01758 270 FunFam Homeobox-leucine zipper protein 18 110 187 - -
Mepo1g01758 270 MobiDBLite consensus disorder prediction 92 122 - -
Mepo1g01758 270 Gene3D - 132 178 - -
Mepo1g01758 270 MobiDBLite consensus disorder prediction 26 49 - -
Mepo1g01758 270 Coils Coil 188 218 - -
Mepo1g01758 270 SUPERFAMILY Homeodomain-like 120 183 IPR009057 -
Mepo1g01758 270 Pfam Homeobox associated leucine zipper 182 216 IPR003106 GO:0006355|GO:0043565
Mepo1g01758 270 Pfam Homeodomain 126 180 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01758 Mepo-Chr1 17472295 17473999 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01758 1 270 Homeobox Transcription Factor Family AT4G37790 61.806 4.67e-92 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo1g01758 Homeodomain 1.7e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01758 K09338 - gmx:100795135 336.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00610 5 5659658 5661840 Mepo1g01758 1 17472295 17473999 PCT