Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01750 ATGCATCCCCTTCTACCACTTCTTCTCTTCCTCCTCTCATTCAACCTTAACCAAGTACTTTCCACACCCCACATCTCTGAATACCACTCCCTCCTCTCCTTCAAATCCTCCATAACTAACGACCCACAAAACATCCTCACCTCATGGAACCCAAAAACCCCTTACTGTTCCTGGTACGGTATCAAATGTTCCCAACACCGCCACGTCATTTCTCTCAACCTCACCTCCCTCTCCCTCACCGGCACCCTCTCCCTCTCCAACCTCCCTTTCCTCACCAATCTCTCCCTCGCCGACAACAAATTCTCCGGCTCAATACCCTCTTCTCTCTCCTCTCTCTCTTCTCTCCGCTTTCTCAATCTCTCCAACAACATCTTCAACGGTACTCTCCCTACTCAACTCTCCAACCTCTTCAATCTTCAAGTTCTTGACCTCTACAACAACAACATGACCGGTTCACTTCCTGTTTCGGTTACCCATCTCGCTTTTCTCCGCCATTTGCATCTTGGTGGTAACTTTTTCACCGGAAAAATACCACCGGAGTATGGCTCTTGGACTCATTTAGAATATCTTGCTGTTTCTGGTAATGAACTTTCCGGTCATATTCCACCGGAGATTGGTAACATTACTTCCCTTAAAGAGCTTTACATTGGTTACTTTAACACCTACGACGGTGGTATTCCACCGGAGATAGGAAATTTGTCGGAGATGGTGAGATTTGATGCTGCTTACTGTGGTTTAACCGGTGAAGTTCCACCGGAGTTGGGTAAGCTTCAGAAGTTGGATACTTTGTTTCTTCAAGTGAATGCACTTTCTGGGTCGCTTACACCGGAGTTAGGGAACTTGAAGAGCTTGAAATCAATGGATTTGTCGAATAATGCTTTCACCGGTGAAGTTCCGGCGAGTTTTGCTGAGTTGAAGAATCTGACACTTTTGAATTTGTTTAGAAATAAGCTTCATGGTGCTATACCGGAGTTTATCGGGGAAATGCCGGCGCTTGAAGTGTTGCAGATTTGGGAGAATAACTTCACTGGAAGTATTCCTCAGAGTTTGGGAAGAAATGGTAAACTCACTCTTGTTGATGTTTCTTCAAACAAGTTAACTGGTTCTCTTCCACCTTATATGTGTTTTGGTAACAAGCTTCAAACTTTGATAGCTTTAGGGAATTTTCTTTTTGGTCCTATTCCAGATTCACTTGGAAAGTGTAAATCTTTGAGTAGAATAAGAATGGGTGAGAATTTTCTTAATGGTTCAATTCCAAAAGGACTTTTTGGTCTTCCTGAATTGACACAAGTTGAGCTTCAAGATAATCTTTTATCTGGTAACTTTCCTCAACCTTTTTCAATGTCTCCAAATCTTGGTCAAGTTACTCTTTCCAACAATAAGCTTTCTGGGCCATTACCACCTTCCATTGGGAATTTCACTAGTGTTCAAAAGCTTATACTTGATGGTAACCAGTTTTCAGGTAAAATCCCTGCTGAGATTGGAAAGTTACATCAGCTTTCTAAGATAGATTTTAGTCATAACAAATTCTCTGGTCCTATTGCGCCCGAGATAAGTCGCTGTAAGCTTTTAACTTTCGTTGATCTTAGTCGTAATGAGCTTTCTGGTGAGATTCCTAAGGAAATCACTAAGATGAAGATATTGAATTACTTGAACCTTTCAAGGAACCATCTTGTTGGTACTATTCCAGGTTCCATTGCTTCAATGCAAAGCTTAACTTCTGTTGATTTTTCATACAATAATCTCACTGGTTTGGTTCCTGGTACTGGCCAATTTAGTTACTTTAACTACACTTCTTTCCTTGGTAACCCTGAACTTTGTGGACCTTATTTGGGTCCTTGCAAAGATGGTGTTGCTAATGGACCTCGTCAACCTCACGTTAAAGGACCACTCTCTTCTACTGTGAAGCTTTTGCTCGTTGTTGGGTTGCTTGTTTGCTCCGCTATATTTGCTGTTGTAACGATATTCAAAGCTAGGTCTTTGAAAAAGGCGAGTGAAGCTCGTGCATGGAAATTAACTGCATTCCAACGTTTGGACTTCACGGTTGATGATGTTCTCGATTCCTTGAAAGAGGATAACATCATAGGAAAAGGTGGTGCTGGCATTGTTTACAAAGGTGCCATGCCTAATGGTGATCTTGTTGCTGTGAAAAGGTTACCGGCTATGAGTAGAGGCTCTTCACATGATCATGGTTTCAATGCTGAGATTCAAACTTTGGGTAGAATTCGACACAGGCACATTGTTAGATTATTGGGTTTCTGCTCAAACCATGAGACAAATCTTTTGGTTTACGAGTACATGCCTAATGGAAGTTTAGGTGAAGTTCTTCATGGTAAGAAAGGTGGTCATTTGCATTGGGATACAAGGTACAAAATTGCTGTGGAAGCTGCAAAGGGTCTTTGTTATCTGCATCATGACTGTTCACCTCTTATTGTTCACCGTGATGTGAAATCAAACAATATCTTGCTTGATTCAGGCTTTGAAGCCCATGTTGCTGATTTTGGACTTGCCAAGTTCTTGCAAGATTCTGGAACTTCTGAATGCATGTCTGCTATTGCTGGTTCTTATGGATACATAGCTCCAGAGTATGCATACACATTGAAAGTCGACGAGAAAAGCGACGTCTACAGCTTCGGTGTGGTACTTCTAGAGCTTGTAGCAGGAAGAAAACCAGTTGGAGAATTTGGTGATGGGGTAGACATTGTGCAATGGGTGAGAAAAATGACAGATTCAAACAAAGAAGGTGTTCTAAAAGTTCTTGATCCTAGACTTCCTTCAGTTCCACTTCATGAGGTGATGCATGTGTTCTATGTAGCCATGTTATGTGTCGAAGAACAAGCTGTAGAAAGACCAACTATGCGCGAAGTTGTTCAAATGCTCACTGAGCTTCCAAAACCACCTAGCTCAAAACATGTTGAAGAAGACTTAACAACATTAACAATCAATGAATCCTCGTTGTCTTCATCAAACAGTTTAGAGTCTCCATCTAAAGATCCTAAAGATCTTCTTAGCATATGA 3018 0.4158 MHPLLPLLLFLLSFNLNQVLSTPHISEYHSLLSFKSSITNDPQNILTSWNPKTPYCSWYGIKCSQHRHVISLNLTSLSLTGTLSLSNLPFLTNLSLADNKFSGSIPSSLSSLSSLRFLNLSNNIFNGTLPTQLSNLFNLQVLDLYNNNMTGSLPVSVTHLAFLRHLHLGGNFFTGKIPPEYGSWTHLEYLAVSGNELSGHIPPEIGNITSLKELYIGYFNTYDGGIPPEIGNLSEMVRFDAAYCGLTGEVPPELGKLQKLDTLFLQVNALSGSLTPELGNLKSLKSMDLSNNAFTGEVPASFAELKNLTLLNLFRNKLHGAIPEFIGEMPALEVLQIWENNFTGSIPQSLGRNGKLTLVDVSSNKLTGSLPPYMCFGNKLQTLIALGNFLFGPIPDSLGKCKSLSRIRMGENFLNGSIPKGLFGLPELTQVELQDNLLSGNFPQPFSMSPNLGQVTLSNNKLSGPLPPSIGNFTSVQKLILDGNQFSGKIPAEIGKLHQLSKIDFSHNKFSGPIAPEISRCKLLTFVDLSRNELSGEIPKEITKMKILNYLNLSRNHLVGTIPGSIASMQSLTSVDFSYNNLTGLVPGTGQFSYFNYTSFLGNPELCGPYLGPCKDGVANGPRQPHVKGPLSSTVKLLLVVGLLVCSAIFAVVTIFKARSLKKASEARAWKLTAFQRLDFTVDDVLDSLKEDNIIGKGGAGIVYKGAMPNGDLVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEVLHGKKGGHLHWDTRYKIAVEAAKGLCYLHHDCSPLIVHRDVKSNNILLDSGFEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELVAGRKPVGEFGDGVDIVQWVRKMTDSNKEGVLKVLDPRLPSVPLHEVMHVFYVAMLCVEEQAVERPTMREVVQMLTELPKPPSSKHVEEDLTTLTINESSLSSSNSLESPSKDPKDLLSI 1005
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01750 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 333 618 - -
Mepo1g01750 1005 Gene3D Ribonuclease Inhibitor 25 179 IPR032675 -
Mepo1g01750 1005 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Mepo1g01750 1005 ProSitePatterns Serine/Threonine protein kinases active-site signature. 811 823 IPR008271 GO:0004672|GO:0006468
Mepo1g01750 1005 Gene3D Transferase(Phosphotransferase) domain 1 767 984 - -
Mepo1g01750 1005 ProSiteProfiles Protein kinase domain profile. 689 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01750 1005 Pfam Protein tyrosine and serine/threonine kinase 691 960 IPR001245 GO:0004672|GO:0006468
Mepo1g01750 1005 SMART serkin_6 689 960 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01750 1005 SUPERFAMILY RNI-like 71 391 - -
Mepo1g01750 1005 SUPERFAMILY Protein kinase-like (PK-like) 682 960 IPR011009 -
Mepo1g01750 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 658 766 - -
Mepo1g01750 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 767 977 - -
Mepo1g01750 1005 Gene3D Phosphorylase Kinase; domain 1 655 766 - -
Mepo1g01750 1005 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 82 325 - -
Mepo1g01750 1005 MobiDBLite consensus disorder prediction 965 1005 - -
Mepo1g01750 1005 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 379 961 - -
Mepo1g01750 1005 SMART LRR_typ_2 569 592 IPR003591 -
Mepo1g01750 1005 SMART LRR_typ_2 136 160 IPR003591 -
Mepo1g01750 1005 SMART LRR_typ_2 497 521 IPR003591 -
Mepo1g01750 1005 SMART LRR_typ_2 88 112 IPR003591 -
Mepo1g01750 1005 SMART LRR_typ_2 305 329 IPR003591 -
Mepo1g01750 1005 SMART LRR_typ_2 281 304 IPR003591 -
Mepo1g01750 1005 MobiDBLite consensus disorder prediction 973 997 - -
Mepo1g01750 1005 Gene3D Ribonuclease Inhibitor 180 325 IPR032675 -
Mepo1g01750 1005 Pfam Leucine Rich Repeat 163 179 IPR001611 GO:0005515
Mepo1g01750 1005 SUPERFAMILY L domain-like 354 614 - -
Mepo1g01750 1005 Gene3D Ribonuclease Inhibitor 326 619 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01750 Mepo-Chr1 17374308 17378325 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01750 25 995 Receptor kinase-like Gene Family AT5G65700 80.266 0.0 1575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mepo1g01750 PK_Tyr_Ser-Thr 4.2e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01750 - - gmx:100499646 1642.09