Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01748 ATGGGACATCGTATTCACACGTGCTTAATAGAGAACCGGGGTATGAAACGTGTTGTTCTACAAGCTCTCTCTATAAAAACAAGTTACCAAATATCTTCACAAACAAATAACAACAACACTTCATCTCTTCTCTTTCTTGATCTATCTTCAACCAAGCTTGTGCATACAAATAATTCAAGCCGAAAGATGATTCAAATTTCGTCCAACATGCCTGAATTTGGATTAGTGGAGGACACTACTTTATTTAGTGATCATGAATACGCAATGGATTCATTTGCATTCCAGTTTGATAATATGGAATACTTCAAGTCTTTCTCAGCATCCCCACAAGAGAGTACTTATTCCTCTCATAACAACAACGACAACAACAAACGAATCCATTCTGAAAGCACACAGAACAGTTCTTTCCCCATTGAAAGTAGTCCTGGTCAATCTGTAGCTTCAGCTACACCAACAAAACTACAACTCAAACCCTCATCCTCTTCATCTTCCAAAATTATTTCTTTTGAACCCAACATGGATGCAAAGGTGAAGAAGCCTAAAACCGAGATCGGGTATGGAGAAAATTTGAACTTTGGAAGTGTGATATCTCAAGGTGATTATTATAAACGAGAGAACAAGGTTGCTGCAATAAATAGAAACCCTATTCAGGCTCAAGATCATGTTATAGCCGAAAGAAGACGAAGGGAAAAGCTTAGCCAGAGATTCATTGTTCTTTCATCTCTTCTTCCTGGACTCAAAAAGATGGACAAGGCAACTGTTTTGGAAGATGCTATAAAGCATATGAAACAACTACAGGAAAGAGTGAAGACTTTAGAGGAACAAGTAGCCGATAAAAAAGTCGAATCAGCTATTTTTCTGAAGAGATCTATTCTCTTTGACGAAGATGATAGCTCCGCTTGCGACGAAAATTCAGACCAATCACTCCCAAAAATTGAAGCAAGAGTTTCTGGAAAAGACATGCTCATCAGAATCCATTGTGACAAACATTGTGGCCGAGCTGCTACCGCAATACTCAACGAATTAGAAAAGCATCACCTCACTGTTCAGAGCAGTTCTACTTTGCCATTTGGAAATAACTATCTTGATATAACAATTATTGCTCGGGTAAAATTTACTTAA 1122 0.3797 MGHRIHTCLIENRGMKRVVLQALSIKTSYQISSQTNNNNTSSLLFLDLSSTKLVHTNNSSRKMIQISSNMPEFGLVEDTTLFSDHEYAMDSFAFQFDNMEYFKSFSASPQESTYSSHNNNDNNKRIHSESTQNSSFPIESSPGQSVASATPTKLQLKPSSSSSSKIISFEPNMDAKVKKPKTEIGYGENLNFGSVISQGDYYKRENKVAAINRNPIQAQDHVIAERRRREKLSQRFIVLSSLLPGLKKMDKATVLEDAIKHMKQLQERVKTLEEQVADKKVESAIFLKRSILFDEDDSSACDENSDQSLPKIEARVSGKDMLIRIHCDKHCGRAATAILNELEKHHLTVQSSSTLPFGNNYLDITIIARVKFT 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01748 373 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 216 265 IPR011598 GO:0046983
Mepo1g01748 373 MobiDBLite consensus disorder prediction 109 167 - -
Mepo1g01748 373 PANTHER BHLH TRANSCRIPTION FACTOR 100 370 - -
Mepo1g01748 373 Coils Coil 255 282 - -
Mepo1g01748 373 CDD bHLH_AtNAI1_like 218 290 - -
Mepo1g01748 373 Pfam Helix-loop-helix DNA-binding domain 219 266 IPR011598 GO:0046983
Mepo1g01748 373 SMART finulus 222 271 IPR011598 GO:0046983
Mepo1g01748 373 Gene3D - 212 278 IPR036638 GO:0046983
Mepo1g01748 373 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 221 283 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01748 Mepo-Chr1 17342470 17344062 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01748 213 370 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 51.220 1.94e-48 163
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g01748 HLH 2.3e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01748 - - tpra:123921001 421.394