Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01746 ATGACTTCAATGGAGGAATCGTGGACTAATTGGTTGTGTGATATGGAACCAAATGATTACAGTTTCATCAACCAATCAAGCATAAACGCAGAAATTGTTGGTAGTTTAGAGAGTAACTTTGAGAGACCTTCAAAATTACTCAAAACTACTACTACTTGCAGTTCAAGCTATGTCAAAACAGAACACCTCTCACAAAAAACAGCTTCATTTGTCCTTTCGTTTGAAAACGAGAATCCACCACCAATTAAAGTTGAACCAGCCTTGAAGCCAAAAACCAAAGTTTGGAACTCAAAGAATGGATCAAGACGTGTAAAGAATCATGAGAGCAACAAGAAGAACGGTTCATTTTCCAAATCTACAACTTATCACACACCAGATCATATAATTGCTGAGAGAATAAGGAGGGAAAAGATTAGCCAACAATTCATAGCTCTTTCAGCCCTTATTCCAAACCTCAAAAAGATGGACAAGGCCTCAGTGTTGGGTGATGCTATAAAGTATGTGAAGGAGCTTAAGGAACAAGTAAAACTGTTGGAGGAGCAAAGCAAAAGCAAAAGTGTAGAACCGATTACGGTTGTGAAGAAATTGTCTGAACTGTCTGTGGATGTCGATGTTTCGGACACTTCCTCAAATTCATGTAATGGAAACTCTGATGAACCATCAAAAATAAATCTGTCACTGCCTGAAGTTGAAGCTAGTTTGTCGGGGAAGAATGTGCTGATTCGAATCCTCTGTGAGAAAGATAAGGCAGTGATGGTGAATGTATATAGAGAATTAGAGAAACTTCATCTCTTGGTTATCAATGCTAGTTCATTTTCATATGGTTCCTCTGCTCTGGCCATAACCATCATTGCTCAGATGGAGAATGAATTGAACATGAGCATCCAGAAACTGGAAGAGAAACTGAGAGTTGGACTGGTGCAATTGAATTAG 933 0.3869 MTSMEESWTNWLCDMEPNDYSFINQSSINAEIVGSLESNFERPSKLLKTTTTCSSSYVKTEHLSQKTASFVLSFENENPPPIKVEPALKPKTKVWNSKNGSRRVKNHESNKKNGSFSKSTTYHTPDHIIAERIRREKISQQFIALSALIPNLKKMDKASVLGDAIKYVKELKEQVKLLEEQSKSKSVEPITVVKKLSELSVDVDVSDTSSNSCNGNSDEPSKINLSLPEVEASLSGKNVLIRILCEKDKAVMVNVYRELEKLHLLVINASSFSYGSSALAITIIAQMENELNMSIQKLEEKLRVGLVQLN 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01746 310 Coils Coil 161 188 - -
Mepo1g01746 310 Coils Coil 284 304 - -
Mepo1g01746 310 Gene3D - 124 191 IPR036638 GO:0046983
Mepo1g01746 310 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 127 191 IPR036638 GO:0046983
Mepo1g01746 310 SMART finulus 128 177 IPR011598 GO:0046983
Mepo1g01746 310 MobiDBLite consensus disorder prediction 96 121 - -
Mepo1g01746 310 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 122 171 IPR011598 GO:0046983
Mepo1g01746 310 Pfam Helix-loop-helix DNA-binding domain 127 171 IPR011598 GO:0046983
Mepo1g01746 310 PANTHER BHLH TRANSCRIPTION FACTOR 14 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01746 Mepo-Chr1 17320715 17323752 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01746 9 306 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 37.941 6.03e-56 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g01746 HLH 8.7e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01746 - - mtr:11405744 507.679
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01746 1 17320715 17323752 Mepo1g01746 1 17320715 17323752 ECH
Mepo5g00587 5 5302739 5316783 Mepo1g01746 1 17320715 17323752 PCT