Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01745 ATGGAGGAAATCAACAACACACCAATGAACGTATCTGACGAAACCAGCAAATGGCTATCTGATTTGGAAATGGATGAGTATAATTTATTTCCTGATGAATGCAACCTAAACTTCCTTGATGCTAATGAGGAAGAGTTTCTTCCACAAGAACAAACCCAACAACAATGTTTGAGCTCAGAGTCCAATTCCACAACTTTCACCGATGAAACAACTTTTGACTCTTTTGACTTTGGTTTTGAAATTGAGAGACCAACCATGGAGCTGAACACAATTGTTAGTGACAACATCATTGAAACCATTTCACCAAAACTTTCTCCTTCATCATCTAACTCATATTTGCACTCTCAGATTTTGTCTTTTGACAACCTCCCAAATTCACCTCCTACCAACACCCCCCAATTTTGTGGACTCACCCCTAACTTAAACTCAAAGTCAAAACAAAACAAAACAGTGTCAGTGTTTCCACCCCAAATGGGAAACATTCATGTCTCAACTCAAAATCCTAAAGGGTTATCAAAAAATCACAACTTTGCAACAAAAACCTCTCAAACCAAAAGGTCTCGAGCCAACGCTGATGATCATATCATGGCTGAGAGAAAGCGACGAGAGAAACTTAGCCAAAGCTTCATTGCTCTTGCAGCTCTTGTTCCTAACCTGAAAAAGATGGACAAAGCTTCTGTATTAGCTGAATCTATCATATATGTGAAAGAGCTTAAAGAGCGTTTGGAAGTTTTGGAAGAACAAAACAAGAGAACAAAGGTAGAGTCAGTGGTTGTTCTGAAGAAACCAGACCTTCCTATCGATGATGATGATGATGATGATAACTCATCATGTGATGAGAGTATTGAAGGTGCTACTGATTCATCCGTACAAGTGCAAGCAAGAGTGTCAGGGAAAGAGATGCTGATTCGGATTCACTGCCAGAAACATAAGGGGATTCTGGTGAAAGTCATGGCTGAGATTCAAAGCTTTCAATTGTTTGCTGTGAATAGCAGTGTCTTACCCTTTGGGGATTCCATTGACATTACCATCATTGCTCAGATGGGTGAAGGGTACAACTTGAGCATAAAGGAACTTGTCAAGAACCTACGCATGGCAGCATTGAAGTTTATGTCATCAAAGCATGAGTGA 1131 0.3988 MEEINNTPMNVSDETSKWLSDLEMDEYNLFPDECNLNFLDANEEEFLPQEQTQQQCLSSESNSTTFTDETTFDSFDFGFEIERPTMELNTIVSDNIIETISPKLSPSSSNSYLHSQILSFDNLPNSPPTNTPQFCGLTPNLNSKSKQNKTVSVFPPQMGNIHVSTQNPKGLSKNHNFATKTSQTKRSRANADDHIMAERKRREKLSQSFIALAALVPNLKKMDKASVLAESIIYVKELKERLEVLEEQNKRTKVESVVVLKKPDLPIDDDDDDDNSSCDESIEGATDSSVQVQARVSGKEMLIRIHCQKHKGILVKVMAEIQSFQLFAVNSSVLPFGDSIDITIIAQMGEGYNLSIKELVKNLRMAALKFMSSKHE 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01745 376 Pfam Helix-loop-helix DNA-binding domain 194 238 IPR011598 GO:0046983
Mepo1g01745 376 PANTHER BHLH TRANSCRIPTION FACTOR 45 370 - -
Mepo1g01745 376 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 194 256 IPR036638 GO:0046983
Mepo1g01745 376 MobiDBLite consensus disorder prediction 264 284 - -
Mepo1g01745 376 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 189 238 IPR011598 GO:0046983
Mepo1g01745 376 Gene3D - 178 255 IPR036638 GO:0046983
Mepo1g01745 376 Coils Coil 228 255 - -
Mepo1g01745 376 SMART finulus 195 244 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01745 Mepo-Chr1 17313632 17316023 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01745 96 371 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 38.754 6.81e-54 179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g01745 HLH 7.9e-08 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01745 - - gmx:100788128 344.354