Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01742 ATGAACATATCAGCAGACAGCACCTTGTTATCTGATTTGGGAAAGGTGAATGAATACATATTATTTGACGAGGAATGCTACTTGAACTTGCTTGATGCTGACGTGGTAGAAGAGTTTCTATCACGTGACATGGCTAGTGCCATTGCCTTTGAGGAACAAAGAGAGACCCTACAACAATGCATTTCCACCACTCTAAGTGAAACATTCAATGGTGAAACAAGTTTTGAGTCTTTTGACTTTGATTTTGAGAAACCAACCAAGAAGCTGAAATTTTTTGATCAAAGTAACAACATAACCAAAAGCTTTTCACAGCAAATTTCTGCATCTCCATCCTCCTTTCAGTCGTCTCAGATTCCGTCTTTTGACAACTCAAACCCAGCAGAGTTATATGGGTTTGATCCAAAACAAAAAGAAGCCACTTTAGTGCCAAATTTGGAAATCACACATTTTTCATCCCAAACCTCAATTGAGTCTTCAAAAAATCAGAACTTGGAAACTAAAACATCACAATCTAAGAGGTCTTTGGCTCAGGTAAAAGATCACATTATGGTCGAGAGAAAACGAAGAGAGAAACTCGGTCAAGCCTTCATTGCTCTTGCAGAACTCATTCCTGACCTAAAGAAGAAGGACAAGGCTTCAGTATTAGCAGACACAATCAAATACCTCAAAGAGCTTAAAGAGCGTTTGGCAATTTTAGAAGAAGAGGGGAAGAACACAAAGGAAGATAAATCAATGGTGGTTTCTGACAAACCAGATCATTATTGTGAAACTGAAAGTGTTGGTGATGGTACTGCTATCAAGGTAGAAGCAAAAGTGTCAGGGAAAAAGATGTTGATTCGAATCCACTGCAAAAAGCATGATGGACTTCTTGTTAAAGTCATCACAGAGATTCAAAGGTTTCAACTTTTAGTTATCAATAACCGTATTTTAGCCTTTGGAGATTCTTTCCACGACATTACAATCATTGCTGAGGTTGGTGAAGGCTACAACTTGACCATAAAAGAACTCGTTCAGAATCTACGCATGGCAGCATTGAAGTTTATGTCATCGTAA 1053 0.3837 MNISADSTLLSDLGKVNEYILFDEECYLNLLDADVVEEFLSRDMASAIAFEEQRETLQQCISTTLSETFNGETSFESFDFDFEKPTKKLKFFDQSNNITKSFSQQISASPSSFQSSQIPSFDNSNPAELYGFDPKQKEATLVPNLEITHFSSQTSIESSKNQNLETKTSQSKRSLAQVKDHIMVERKRREKLGQAFIALAELIPDLKKKDKASVLADTIKYLKELKERLAILEEEGKNTKEDKSMVVSDKPDHYCETESVGDGTAIKVEAKVSGKKMLIRIHCKKHDGLLVKVITEIQRFQLLVINNRILAFGDSFHDITIIAEVGEGYNLTIKELVQNLRMAALKFMSS 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01742 350 MobiDBLite consensus disorder prediction 152 172 - -
Mepo1g01742 350 Coils Coil 215 242 - -
Mepo1g01742 350 Gene3D - 171 239 IPR036638 GO:0046983
Mepo1g01742 350 PANTHER BHLH TRANSCRIPTION FACTOR 51 347 - -
Mepo1g01742 350 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 181 237 IPR036638 GO:0046983
Mepo1g01742 350 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 176 225 IPR011598 GO:0046983
Mepo1g01742 350 SMART finulus 182 231 IPR011598 GO:0046983
Mepo1g01742 350 Pfam Helix-loop-helix DNA-binding domain 180 225 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01742 Mepo-Chr1 17273960 17276888 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01742 115 348 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G37850 35.628 2.09e-35 130
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Mepo1g01742 HLH 3.1e-09 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01742 - - mtr:25493546 516.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01742 1 17273960 17276888 Mepo1g01742 1 17273960 17276888 ECH