Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01741 ATGGCTGGGTTAGATTTAGGGAGTGCAAGCTTTATGCAAAACATCCACAGGCAAAACTTACACCTTCAGCAACAACACCATCACCAAAACCAGCACGATTCTGAAGAACAAGAATCAAATCGTGCCAGTGTTGGTGGTGGTGCACCGTTCTCATCGAACGAAGAAGATGATCGCAGCCAAGGCTTAGAGCTTGGTTCAGCAGCCGGACCAGGAGACGTGGTAGGCCGCCGTCCACGCGGCAGACCACCGGGATCGAAAAACAAAGCCAAACCACCGGTGATCATCACTCGAGAGAGCGCCAACACTCTTAGAGCTCATATTCTTGAAGTTGCCAGCGGTTCTGATGTTTTTGAATGCGTATCCACCTATGCTCGCCGTCGTCAACGTGGGATCTGTGTTCTTAGCGGCAGTGGCACTGTGACAAATGTCAGTATCCGGCAACCAGCGGCGGCTGGTGGCGTAGTTACCCTACATGGAAGATTTGAGATATTGTCTTTGTCTGGATCTTTTCTTCCACCACCAGCTCCCCCCGGAGCAACTAGCTTAACGATTTATCTTGCTGGAGGACAGGGACAGGTGGTAGGAGGTAGCGTGGTTGGTGAGCTTATCGCGGCCGGGCCAGTGATTGTGATTGCAGCTTCTTTTACTAATGTTGCTTATGAGAAGTTGCCTTTGGAAGAGGAGCAGCTTCAGATGCAGGCTGAGGCTGGAGGAGGTTCTCAAGGCTCCGGTGGTGGCGGCGGTGGCAATAACAATAACAATAACAATCCATTTCCTGATCCATCTTCTGGTTTACCGTTTTTCAATTTGCCATTGAATATGCAGAATGTTCATCAGTTACCTGTTGATGGTTGGGCGGGAAATAACAACTCAGCTTCACGTCAACCTTTTTGA 894 0.4978 MAGLDLGSASFMQNIHRQNLHLQQQHHHQNQHDSEEQESNRASVGGGAPFSSNEEDDRSQGLELGSAAGPGDVVGRRPRGRPPGSKNKAKPPVIITRESANTLRAHILEVASGSDVFECVSTYARRRQRGICVLSGSGTVTNVSIRQPAAAGGVVTLHGRFEILSLSGSFLPPPAPPGATSLTIYLAGGQGQVVGGSVVGELIAAGPVIVIAASFTNVAYEKLPLEEEQLQMQAEAGGGSQGSGGGGGGNNNNNNNPFPDPSSGLPFFNLPLNMQNVHQLPVDGWAGNNNSASRQPF 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01741 297 MobiDBLite consensus disorder prediction 234 265 - -
Mepo1g01741 297 MobiDBLite consensus disorder prediction 22 94 - -
Mepo1g01741 297 SUPERFAMILY AF0104/ALDC/Ptd012-like 100 232 - -
Mepo1g01741 297 Pfam Plants and Prokaryotes Conserved (PCC) domain 104 217 IPR005175 -
Mepo1g01741 297 ProSiteProfiles PPC domain profile profile. 100 236 IPR005175 -
Mepo1g01741 297 CDD DUF296 104 187 IPR005175 -
Mepo1g01741 297 MobiDBLite consensus disorder prediction 233 265 - -
Mepo1g01741 297 Gene3D - 103 236 - -
Mepo1g01741 297 PIRSF ESCAROLA 9 297 IPR014476 GO:0003680
Mepo1g01741 297 FunFam AT-hook motif nuclear-localized protein 103 230 - -
Mepo1g01741 297 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 29 276 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01741 Mepo-Chr1 17220070 17221365 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01741 1 297 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 57.188 1.84e-95 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01741 - - pvu:PHAVU_003G230600g 343.584