Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01737 ATGCCAGTTCCACTTGCTCCTTATCCAACTCCACCTCCAGCTCCTGCTCCAGCTCCATATACAACACCTCCAACAAATGGTGCACAGAGTCAACTTGTGTGTTCTGGTTGTAGAAACCTTCTAATGTATCCAGTTGGAGCCACTTCTGTATGCTGTGCTGTTTGCAATGCTGTCACAGCAGTGCCACCTCCTGGCACAGAAATGGCTCAGTTAGTTTGTGGAGGATGCCATACTCTACTCATGTACATCCGCGGAGCGACGAGTGTTCAATGCTCTTGTTGTCACACAGTCAATCTAGCTCTGGAAGCAAATCAGGTGGCACATGTCAACTGTGGTAACTGCAGGATGCTACTTATGTATCAATATGGAGCAAGATCCGTGAAATGTGCAGTTTGCAATTTTGTTACCTCAGTTGGGGTCAGTAAAGTTTCTTGTTCCACACTAACTTTTCCTCTTTTCTATTTTGAAGAGAAACAATGTAATAAATTTTAA 492 0.4411 MPVPLAPYPTPPPAPAPAPYTTPPTNGAQSQLVCSGCRNLLMYPVGATSVCCAVCNAVTAVPPPGTEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEANQVAHVNCGNCRMLLMYQYGARSVKCAVCNFVTSVGVSKVSCSTLTFPLFYFEEKQCNKF 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01737 163 MobiDBLite consensus disorder prediction 1 23 - -
Mepo1g01737 163 SUPERFAMILY Multiheme cytochromes 34 132 IPR036280 -
Mepo1g01737 163 MobiDBLite consensus disorder prediction 1 22 - -
Mepo1g01737 163 NCBIfam zinc finger domain, LSD1 subclass 70 99 IPR005735 -
Mepo1g01737 163 NCBIfam zinc finger domain, LSD1 subclass 108 138 IPR005735 -
Mepo1g01737 163 NCBIfam zinc finger domain, LSD1 subclass 31 61 IPR005735 -
Mepo1g01737 163 PANTHER PROTEIN LSD1 16 61 IPR040319 -
Mepo1g01737 163 Pfam LSD1 zinc finger 73 97 IPR005735 -
Mepo1g01737 163 Pfam LSD1 zinc finger 34 58 IPR005735 -
Mepo1g01737 163 Pfam LSD1 zinc finger 111 135 IPR005735 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01737 Mepo-Chr1 17185474 17187680 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Mepo1g01737 zf-LSD1 1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01737 - - csav:115716485 253.832