Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01730 ATGGAAGGAGCATTACTTCCACCCGGTTTTCGTTTCCATCCAACTGATGAAGAACTAGTTGGATACTATCTTAAAAGAAAAGTGGAAGGACTTGAAATTGAGCTTGATGTTATTCCAGTGATTGATTTTTACAAATTTGATCCATGGGAGTTGCCTGAGAAATCATTTCTACCGAAACGAGATTTAGAATGGTTTTTCTATTGTATGCGAGATCTAAAGTACCCTAATGGATCAAGAACAAATAGAGCTACCAAAGCTGGCTACTGGAAAGCCACTGGAAAAGAGAGAAAGATTGTGTGCCAGTGTAGTTCATCGACGATCACAGGCAACTGCAAAACACTTGTTTTCTATCTTGGAAGGGCTCCTTTAGGCGATAAAACTAACTGGATCATGCAGGAGTATCGCCTCACTGATGATCTTAGCCAAGACTCACCATATTTTAAGGGTGGCTTAGCTTTGTGCCGAGTTGTCAAAAAGAATGAGAAAAGCAAGAGGGTTGCAACAAGTTCCATCATTGGAAGTGAGACCCCAATGAGATTCTCAAGTGATGTTTCTTCTCAAGCAAGTCACCTGAATAATGAGAGTGGATCACAAAATGTCGCTTCAATTGCTGAGTTTAACCATGTTTCCATAGAAACCAATCCTTCAACCTTCTGGATCTCCCCTGATATGATTCTTGATTCTTCAAAGGAGTATACTAGAGTACAAGATGCACTGTTTGAATATTTTCCTCCTAGGCGTGACTCACCAAGGCAATCATTGGAACATTTAACAACTTCACCTACTTTATCCTACTCAAATCTTAATGGTGAAAATGAATTTTCGGATAATGTAAGTCAAAATGGATGCATGTCACCTTACTCAAGTGCTCAAGGGAATTTCATGTACTATAATGGAAATTGGGATGTTCCTTATGAGATTTATAATCAAATTAACTCAGTCTCATATCCAGAGCCTTTCTAA 963 0.3884 MEGALLPPGFRFHPTDEELVGYYLKRKVEGLEIELDVIPVIDFYKFDPWELPEKSFLPKRDLEWFFYCMRDLKYPNGSRTNRATKAGYWKATGKERKIVCQCSSSTITGNCKTLVFYLGRAPLGDKTNWIMQEYRLTDDLSQDSPYFKGGLALCRVVKKNEKSKRVATSSIIGSETPMRFSSDVSSQASHLNNESGSQNVASIAEFNHVSIETNPSTFWISPDMILDSSKEYTRVQDALFEYFPPRRDSPRQSLEHLTTSPTLSYSNLNGENEFSDNVSQNGCMSPYSSAQGNFMYYNGNWDVPYEIYNQINSVSYPEPF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01730 320 FunFam Nac domain-containing protein 86 15 162 - -
Mepo1g01730 320 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 5 221 - -
Mepo1g01730 320 ProSiteProfiles NAC domain profile. 6 159 IPR003441 GO:0003677|GO:0006355
Mepo1g01730 320 Pfam No apical meristem (NAM) protein 7 136 IPR003441 GO:0003677|GO:0006355
Mepo1g01730 320 SUPERFAMILY NAC domain 4 159 IPR036093 GO:0003677|GO:0006355
Mepo1g01730 320 Gene3D NAC domain 15 164 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01730 Mepo-Chr1 17127062 17129388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01730 1 298 NAC Transcription Factor Family AT4G17980 54.153 3.98e-101 297
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mepo1g01730 NAM 1.2e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01730 - - mtr:11415472 625.165