Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01724 ATGGGTTGCTTTCACTCCAAAACTGCTCATCTTCACTCCCCTGAAGACCCTCCTACTGCTTTACCTGACTCAAAGAAAACCGATCCAGGTGATGATGGAGGTGATGGTGATCAAGAAAGTCAAGTTCCAGTATTCAAAGAGTATGGTTTGAATGAACTCAGAAGGGCTACACATGAGTTCAGCACTGATTACATCGTTTCTGAGAGTGGTGAGAAAGCTCCTAATGTGGTTTACAAAGGGAAGCTTGAGAATAATCGATTAGTTGCTGTTAAACGCTTTTCCAAACAGTCTTGGCCTGATGCTCAACAATTTCTGGCAGAGGCAGCTGGAGTTGGGAAAGTGAGGCACAAAAGAATGGTGAATCTAATTGGTTGTTGTGCTGAAGGGGATGAAAGGCTCTTGGTAGCTGAGTACATGCCAAATGATACTTTATCCAAACATCTCTTTCACTGGGACAAACAACCATTACCATGGGAAATGCGCGTTAGAGTTGCATATCATGTTGCCCAGGCACTAGATCACTGTAGCATGGAAAACCGGAAAATATATCACGATCTTAATGCTTACAGGATTCTTTTTGACGAGGATGGTGATCCTCGGTTATCAAGTTTCGGGCTTATGAAAAATAGTCGAGATGGGAAAAGCTATAGTACTAATTTGGCCTATACTCCACCTGAATTTTTGCGAACAGGCCGGATAATTGCAGAGAGTGTGATCTACAGTTACGGCACTGTCCTTCTGGATCTTTTGAGCGGAAAGCATATTCCCCCAAGCCATGCTTTGGACCTAATTAGAGGGAAAAATGCTCTGTTGTTGATGGACTCATCCCTAGAAGGGCAATATGCAAATGATGATGCTACAAAGTTGGTTGAGCTTGCATCCAAATGTCTTCAGTTTGAGGCCAGAGAACGACCTGATATCAAGTTTCTTCTCACTGCCGTTACACCTCTTCAAAAGCAGAAAGAGGTAGCATCTCATGTGTTAATGGGCCTTACTAAAACACCGGCAGTGCTACCATTACCAACCATGCTTTCTCCTCTTGGAAAGGCTTGTGCAAGGATGGATCTTACTGCTATTCATGATATATTGTTAAAAACCGGTTATAAAGATGAAGAAGGTGCAGAAAATGAGCTTTCATTTCAAGAGTGGACACAACAAGTGCAGGACATCTTAAACACAAAAAAGTTTGGCGATATTGCATTTAGAGATAAGGATTTCAAAAATGCAATTGAGTATTATTCCAAGTTGGTGGTTATGATGTCTGTTCCATCCGCAACCGTGTTTGCAAGGAGAGCCTTCGCCTACTTGATGAATGATCAGGCAGAACTTGCATTAAGAGACGCAATGCAGGCACAGGTATGCATACCTGATTGGCCAACTGCATTCTACCTGCAAGCTCTTGCTCTCTCAAAGCTGGGGATGGAAACTGATGCACAAGACATGCTTAATGATGGAGCAGCCTTCGAAGCAAAGAGGTCTAACAGCTGGCGCGGCTAA 1497 0.4322 MGCFHSKTAHLHSPEDPPTALPDSKKTDPGDDGGDGDQESQVPVFKEYGLNELRRATHEFSTDYIVSESGEKAPNVVYKGKLENNRLVAVKRFSKQSWPDAQQFLAEAAGVGKVRHKRMVNLIGCCAEGDERLLVAEYMPNDTLSKHLFHWDKQPLPWEMRVRVAYHVAQALDHCSMENRKIYHDLNAYRILFDEDGDPRLSSFGLMKNSRDGKSYSTNLAYTPPEFLRTGRIIAESVIYSYGTVLLDLLSGKHIPPSHALDLIRGKNALLLMDSSLEGQYANDDATKLVELASKCLQFEARERPDIKFLLTAVTPLQKQKEVASHVLMGLTKTPAVLPLPTMLSPLGKACARMDLTAIHDILLKTGYKDEEGAENELSFQEWTQQVQDILNTKKFGDIAFRDKDFKNAIEYYSKLVVMMSVPSATVFARRAFAYLMNDQAELALRDAMQAQVCIPDWPTAFYLQALALSKLGMETDAQDMLNDGAAFEAKRSNSWRG 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01724 498 FunFam probable serine/threonine-protein kinase At4g35230 388 497 - -
Mepo1g01724 498 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 32 493 IPR045845 GO:0004672|GO:0009742
Mepo1g01724 498 Pfam Protein tyrosine and serine/threonine kinase 76 311 IPR001245 GO:0004672|GO:0006468
Mepo1g01724 498 Gene3D Tetratricopeptide repeat domain 388 497 IPR011990 GO:0005515
Mepo1g01724 498 MobiDBLite consensus disorder prediction 19 33 - -
Mepo1g01724 498 FunFam probable serine/threonine-protein kinase At5g41260 140 331 - -
Mepo1g01724 498 SUPERFAMILY Protein kinase-like (PK-like) 47 315 IPR011009 -
Mepo1g01724 498 SUPERFAMILY TPR-like 389 487 IPR011990 GO:0005515
Mepo1g01724 498 MobiDBLite consensus disorder prediction 1 42 - -
Mepo1g01724 498 Gene3D Transferase(Phosphotransferase) domain 1 140 332 - -
Mepo1g01724 498 FunFam probable serine/threonine-protein kinase At4g35230 35 138 - -
Mepo1g01724 498 Gene3D Phosphorylase Kinase; domain 1 35 138 - -
Mepo1g01724 498 ProSiteProfiles Protein kinase domain profile. 63 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01724 Mepo-Chr1 17046436 17051288 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01724 14 314 Glycoside Hydrolase AT3G07070 33.232 8.28e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Mepo1g01724 PK_Tyr_Ser-Thr 6.6e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01724 K14500 - gmx:100793576 927.161