Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01712 ATGGTTTGTACTGCCAATGATTTACAAGAATGGAAAGAGTTTCCCAAAGGACTCAAGGTTCTTCTCCTTGAGGGAGACAACACTTCTGTTTCTGAGATAAGAGCAAAGCTTGAGGCCATGGACTATAATGTTTCTCTATTCTGTGATGTGGATGAAGCCTTGTCAGCAGTCTCAAGTAAACCTGAAGATTTCCATATAGCCATAGTGGAGGTGAGTTCAAGCAGTTGCGAGGGAGGCTTCAGATTTCTTGAGAATGCCAAGGACTTACCAACCATCATGACTTCAAACAGCGATTGTCTGAACACCATGATGAAGTGCATAGCGCTTGGAGCAGTGGAGTTTCTCAGCAAACCACTCTCTGAGGACAAGCTCAGAAATATTTGGCAGCATGTGGTTCACAAGGCGTTCAATGCTGGGGTAAGTGCGCTGTCTGAATCACTGAAACCTGTCAAGGAATCCGTAGCCTCCATCTTGCAGATTCAAACAGATAACGAACAAAATGAAAGTAAAGCCTCAATCGAGTTAGAGCAAGTATCGAGGTTTGCTGACAATGACCACCATGAGCATTATCCAGCTCCGTCAACCCCGCAATTGAAACAGGTGGGAAGATTACTTGATGATGGGGATTGCCAAGAGCAGACTAACTGCTCCACGGAAAATTGCCAAGAGCAGACTAATTGCTCCACGGAAAAAGAAAGTGGGGAACATGATGGAGAATCTAAATCTGTCGAAATTACATGTGAAAATTTGAATGCTGAAAGTATTACTCAACAAACGAAATCTGAAGCTACTTTGGTTCAGAAGGAAGAGGAGGAATTTGCCGACGCTTCTAAGTGTGAGAGTGTTGTTTCACCACAGTTACTAAATGTGAAGGTTCTAAACAATAGTAAAAGTAATACAACATCTGCAAATAAAGTAGGTGTTCGTAGTCATAAATGTGAGATAAAAGCTAATCGGAAGAAGATGAAAGTAGACTGGACGCCAGAGCTGCACAAAAAATTTGTGAAGGCGGTGGAACAACTAGGCATTGATCACGCTATTCCTTCTCGGATATTGGATCTAATGAAAGCGGAGGGCTTGACAAGGCATAATGTGGCAAGCCATCTTCAGAAATATAGAATGCATAAAAGACATATCTTACCGAAGCCAGAAGATCGGAAATGGCTAAATCCAAGGGATCCAACTCAAAGGAATTATTGTCTTCAAAGACCAATTATGCCCAGTCCTCCATCATATTATTCTAACCATACCCTTCCTCCTCTGGCTCCTTTATATCCCATGTGGGGACAATCTGGAACTCAAACGGCTGGCATGCAGGTTTGGGGCCATTCTGGTTATCCCGTGTGGCAGCCTACAGAAAGTTGGCACTGGAAACCATTTCCGGGGATGCATCCAGATGCATGGGGCTGCCCGGTGTTACCTCCACCTCAACCTCCTTGCTATTCCTACTCTCAGGATATACCTGCAGTGAGTAACGCGAATGCAATGGATTACACGTTTAGCATGCCACATAGTTCCTTCGACGATTATCCGGTAATGCAATACTTTCCCTTCAGTTTCTTTCTATTTGATCATAGTAGCCACATGCAAGTAACCAGTTTATATATTCTGATTAGCACCATTTCATGTTGTGATGAAATCGTAGTCCTGCATAAAAGCATTAAAAAGATTGAAAATCCAAAAAAAGTTCAGTGCTTCAAACTCGATTTATAA 1713 0.4267 MVCTANDLQEWKEFPKGLKVLLLEGDNTSVSEIRAKLEAMDYNVSLFCDVDEALSAVSSKPEDFHIAIVEVSSSSCEGGFRFLENAKDLPTIMTSNSDCLNTMMKCIALGAVEFLSKPLSEDKLRNIWQHVVHKAFNAGVSALSESLKPVKESVASILQIQTDNEQNESKASIELEQVSRFADNDHHEHYPAPSTPQLKQVGRLLDDGDCQEQTNCSTENCQEQTNCSTEKESGEHDGESKSVEITCENLNAESITQQTKSEATLVQKEEEEFADASKCESVVSPQLLNVKVLNNSKSNTTSANKVGVRSHKCEIKANRKKMKVDWTPELHKKFVKAVEQLGIDHAIPSRILDLMKAEGLTRHNVASHLQKYRMHKRHILPKPEDRKWLNPRDPTQRNYCLQRPIMPSPPSYYSNHTLPPLAPLYPMWGQSGTQTAGMQVWGHSGYPVWQPTESWHWKPFPGMHPDAWGCPVLPPPQPPCYSYSQDIPAVSNANAMDYTFSMPHSSFDDYPVMQYFPFSFFLFDHSSHMQVTSLYILISTISCCDEIVVLHKSIKKIENPKKVQCFKLDL 570
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01712 570 Gene3D - 317 379 - -
Mepo1g01712 570 Gene3D - 18 141 - -
Mepo1g01712 570 SUPERFAMILY CheY-like 16 134 IPR011006 -
Mepo1g01712 570 Pfam Response regulator receiver domain 20 127 IPR001789 GO:0000160
Mepo1g01712 570 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 318 377 IPR017930 -
Mepo1g01712 570 PANTHER TRANSCRIPTION ACTIVATOR GLK1 1 508 IPR044825 GO:0003700|GO:0045893
Mepo1g01712 570 NCBIfam myb-like DNA-binding domain, SHAQKYF class 321 376 IPR006447 GO:0003677
Mepo1g01712 570 SUPERFAMILY Homeodomain-like 320 378 IPR009057 -
Mepo1g01712 570 SMART REC_2 18 128 IPR001789 GO:0000160
Mepo1g01712 570 Pfam Myb-like DNA-binding domain 324 373 IPR001005 -
Mepo1g01712 570 ProSiteProfiles Response regulatory domain profile. 19 132 IPR001789 GO:0000160
Mepo1g01712 570 FunFam Two-component response regulator 317 380 - -
Mepo1g01712 570 MobiDBLite consensus disorder prediction 221 241 - -
Mepo1g01712 570 FunFam Two-component response regulator-like APRR2 17 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01712 Mepo-Chr1 16892914 16899327 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01712 1 492 Response Regulator Gene Family AT4G18020 46.863 6.65e-122 368
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-ARR-B Mepo1g01712 Response_reg 9.4e-08 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01712 - - psat:127074291 795.808
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00562 5 5009979 5016269 Mepo1g01712 1 16892914 16899327 PCT