Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01711 ATGGGTTTCAGCAGCTGTGCAAATTTGTTTTCTGTTTTGTTTATCCTGTGTTGCTATTCCCTACAATTTAGTATTGCAATAGACACCATCACATCATCCCAATTCATCAAGGACCCTACAACTCTACTCTCCAAAGATGGCAACTTCACATTGGGATTCTTTAGCCCTAAGAATTCTACAAATCGCTACGTTGGAATTTGGTGGAAGTCTCAGTCTACAATCATATGGGTGGCAAATAGAAACCAACCACTGAATGATTCTAATGGGATTATTACTATATCTGAGGATGGCAATCTTGTGGTATTGAATGGACAAAAACAAGTCATTTGGTCATCAAATTTGTCTAACACAGCCTCAAATACTACTGCCCAGTTTTCAGATTATGGTAACCTTGTCCTTTTGGAAAGCACAATAGAAAGCACCTTGTGGCAGAGTTTTCAGAAACCTTCAGATACACTTCTGCCAGGCATGAAACTTACAAGCAACAAAAGAACAGGTGAGAAAGTACAACTCACATCATGGAAAAACCCTTCAGATCCATCTGTTGGAAGCTTTTCTATTAGTTTTATTGACCGCATAAATTTACACGAGCTGTTCATTTTCAATGAAACTCAGCCATACTGGCGAAGCGGTCCTTGGGATGGTGTAGTTTTTACTGGGATGCAGATGATGACAACCCCATATATTAATGGTGATCGTGTAGGAGATGATGGGGAGGGAAATATTTATATCTATTATACAGTACCAAAAGATATAACACTGGTAGTCTACAATCTGAACTCGCAAGGCCAATTAATAGCAAAATGGTGGGATTATGAGAAGAAAGATGTACAAATTATATGGAGTAGCCAACTATCGGAATGTGACGTTTATGGTATATGTGGGGCATTTTCAAGCTGTAGTTCGTTGAAGTTACCGATATGCAGTTGTTTGAGAGGATTTGAACCCAGGAACGAACAAGAGTGGAATAGACACAACTGGACAGGTGGGTGTGTCAGAAGGACACTTTTGCATTGTGAAAAGGTCAATAATATGACCAAAAGTACAAAGGAAAATGGGTTTTTGAAATTGCAGATGGTTAAAGTTCCCGATTTTGCACAAGGTTCAGCAGTTACACCAGACATATGTAGAAGCCAATGCATAGAGAATTGCTCTTGCATTGCATATTCTCACACCACTGGGATTGGTTGTATGTCTTGGACCGGCAATCTAATTGATGTACAACAATTCCAAAATGGAGGACTTGATCTATATGTTCGTGTAGCCTATGCAGAACTTGAAGGGCTTCTAACAACCCGGCAGGAGCTGTTACAATTTGATTTTGAAAAGCTTGCAATTGCCACTAATAACTTCCACTCGTCCAATAAACTTGGACAGGGTGGTTTTGGTCCGGTATACAAGGGAAAATTACAAGACAATCAGAACATAGCAGTTAAGAGACTTTCTAGATCATCCGGACAGGGACTAGAAGAATTCAAGAATGAAGTAGTTGTGATTTGTAAGCTTCAGCATCGCAATCTTATAAGACTTATTGGCTGCTGTGTTGAAGCCGAGGAAAAGATGTTGATATACGAGTACATGCCAAATAAAAGTTTGGATGCATTTGTCTTTGATCCATCAAGAAATAAACTCCTAGACTGGAGGACCCGGTATAACATTATAGAAGGAATAGCTCGAGGATTGCTTTATCTTCATAGAGATTCCAAATTGAGAATTATACACAGAGATCTAAAGACAAGTAACATCTTGTTAGACAAGGAGTTGAATCCAAAAATATCAGACTTTGGTATGGCTAGAATCTTTGGAGGGAGAGAAGATAAGGCCAATACTATTAGGGTTGTCGGAACTTACGGTTATATGTCCCCTGAATATGCAATGCAAGGACTGTTTTCAGAGAAATCAGATATCTTTAGCTTTGGTGTTTTGATACTAGAGATTATTAGTGGGAGAAGAAACTCAAGCTTTTATGACAATGAGCATGCACTGACCCTTTTAGGATTTGTTTGGATACAATGGAGGGAAGGCAATATTTTATCTTTTATAGACCAAGAAATATATGATCCTAGTCACCATAAGTATGTTGTAAGGTGTATACACATTGGACTTCTGTGTGTACAAGAGCTTGCTGTAGACAGGCCTAATATGGCTGCAGTAATTTATATGCTTAACAGTGAGACTGAATTACTTCCTCCTCCAAGTCAACCTGCGTTTATCTTGAGGCAAAATATGTTGAGTTCAATGTCTCACGAAGAAATTCGTAGACGCTATTCAATCAATAATTCTACAATCATATGGGTGGCAAACAGAAACCAAACACTGAACGATTCTAATGGAACTGTCACAATATCTGAAGATGGAAATCTTGTGGTATTGAATGTACAGAAACAAGTCATTTGGACATCAAATGTTTCCAACATAGCATCCAATACAAGTTCTCAGTTTTCAAACTTTGGTAACCTTGTCCTTTTGGAGAGTACAACTGGAAACATTTTATGGCAGAGCATTCAGCAACTGTCAGATACGTTACTACCTAGTATAAAACTATCAATCAACAAAAGAACAGGAGATGGTGGACAAGGGAATATTGATATGTATTATACTTTACAAAATGATGAGGAGTTTTTGATCTGTCACCTGACATCACAAGGAAATTTAGATGAAACGCGGTGGGATGATGAGAAGAAAGAAATGAAAGTGACAGGGACAAGCCGAGAATCAGAGTGTGATGTTTATGGTTTATGTGGAGCATTTGCAAGCTGTAATTCATTGAGGTCACCAATATGTAGCTGTTGA 2793 0.3842 MGFSSCANLFSVLFILCCYSLQFSIAIDTITSSQFIKDPTTLLSKDGNFTLGFFSPKNSTNRYVGIWWKSQSTIIWVANRNQPLNDSNGIITISEDGNLVVLNGQKQVIWSSNLSNTASNTTAQFSDYGNLVLLESTIESTLWQSFQKPSDTLLPGMKLTSNKRTGEKVQLTSWKNPSDPSVGSFSISFIDRINLHELFIFNETQPYWRSGPWDGVVFTGMQMMTTPYINGDRVGDDGEGNIYIYYTVPKDITLVVYNLNSQGQLIAKWWDYEKKDVQIIWSSQLSECDVYGICGAFSSCSSLKLPICSCLRGFEPRNEQEWNRHNWTGGCVRRTLLHCEKVNNMTKSTKENGFLKLQMVKVPDFAQGSAVTPDICRSQCIENCSCIAYSHTTGIGCMSWTGNLIDVQQFQNGGLDLYVRVAYAELEGLLTTRQELLQFDFEKLAIATNNFHSSNKLGQGGFGPVYKGKLQDNQNIAVKRLSRSSGQGLEEFKNEVVVICKLQHRNLIRLIGCCVEAEEKMLIYEYMPNKSLDAFVFDPSRNKLLDWRTRYNIIEGIARGLLYLHRDSKLRIIHRDLKTSNILLDKELNPKISDFGMARIFGGREDKANTIRVVGTYGYMSPEYAMQGLFSEKSDIFSFGVLILEIISGRRNSSFYDNEHALTLLGFVWIQWREGNILSFIDQEIYDPSHHKYVVRCIHIGLLCVQELAVDRPNMAAVIYMLNSETELLPPPSQPAFILRQNMLSSMSHEEIRRRYSINNSTIIWVANRNQTLNDSNGTVTISEDGNLVVLNVQKQVIWTSNVSNIASNTSSQFSNFGNLVLLESTTGNILWQSIQQLSDTLLPSIKLSINKRTGDGGQGNIDMYYTLQNDEEFLICHLTSQGNLDETRWDDEKKEMKVTGTSRESECDVYGLCGAFASCNSLRSPICSC 930
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01711 930 Gene3D Phosphorylase Kinase; domain 1 416 526 - -
Mepo1g01711 930 Pfam PAN-like domain 349 407 IPR003609 -
Mepo1g01711 930 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 527 730 - -
Mepo1g01711 930 CDD B_lectin 33 146 IPR001480 -
Mepo1g01711 930 SMART ntp_6 349 421 IPR003609 -
Mepo1g01711 930 FunFam Os04g0303100 protein 67 207 - -
Mepo1g01711 930 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 713 - -
Mepo1g01711 930 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 421 526 - -
Mepo1g01711 930 ProSiteProfiles PAN/Apple domain profile. 339 422 IPR003609 -
Mepo1g01711 930 PIRSF SRK 752 861 IPR024171 GO:0004674
Mepo1g01711 930 PIRSF SRK 427 762 IPR024171 GO:0004674
Mepo1g01711 930 PIRSF SRK 856 930 IPR024171 GO:0004674
Mepo1g01711 930 PIRSF SRK 1 435 IPR024171 GO:0004674
Mepo1g01711 930 SMART serkin_6 451 694 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01711 930 SUPERFAMILY alpha-D-mannose-specific plant lectins 763 855 IPR036426 -
Mepo1g01711 930 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Mepo1g01711 930 SMART blect_4 719 838 IPR001480 -
Mepo1g01711 930 SMART blect_4 33 149 IPR001480 -
Mepo1g01711 930 CDD PAN_AP_plant 335 422 - -
Mepo1g01711 930 Gene3D - 726 836 IPR036426 -
Mepo1g01711 930 Gene3D - 23 147 IPR036426 -
Mepo1g01711 930 ProSitePatterns Serine/Threonine protein kinases active-site signature. 572 584 IPR008271 GO:0004672|GO:0006468
Mepo1g01711 930 Pfam S-locus glycoprotein domain 856 930 IPR000858 GO:0048544
Mepo1g01711 930 Pfam S-locus glycoprotein domain 208 317 IPR000858 GO:0048544
Mepo1g01711 930 SUPERFAMILY alpha-D-mannose-specific plant lectins 65 180 IPR036426 -
Mepo1g01711 930 Pfam D-mannose binding lectin 762 855 IPR001480 -
Mepo1g01711 930 Pfam D-mannose binding lectin 73 175 IPR001480 -
Mepo1g01711 930 SUPERFAMILY Protein kinase-like (PK-like) 435 753 IPR011009 -
Mepo1g01711 930 ProSiteProfiles Protein kinase domain profile. 451 729 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mepo1g01711 930 ProSiteProfiles Bulb-type lectin domain profile. 713 835 IPR001480 -
Mepo1g01711 930 Pfam Protein tyrosine and serine/threonine kinase 453 719 IPR001245 GO:0004672|GO:0006468
Mepo1g01711 930 Gene3D Transferase(Phosphotransferase) domain 1 527 725 - -
Mepo1g01711 930 CDD STKc_IRAK 457 723 - -
Mepo1g01711 930 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 23 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01711 Mepo-Chr1 16868824 16873315 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01711 432 740 Receptor kinase-like Gene Family AT4G05200 57.929 1.68e-122 386
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mepo1g01711 PK_Tyr_Ser-Thr 3.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01711 - - cam:101513672 1094.34