Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01671 ATGGAACTCACTTTTAAGCACCAACTTGGCCTTGTTTGTATCATAATACTCTTACCTCAGCTATGTACCTCACAAGAATCCTTTACTGACTCCAGAGCAACATATTACGGTAGCCCAGATTGCTACGGGACTCCAAGGGGAGCTTGTGGCTTTGGAGAATATGGAAGGACAGTGAATGATGGCAGTGTTGCTGGTGTGTCTAAGCTATGGAAGAATGGTAGTGGCTGTGGTGCATGCTATCAGGTGAGGTGTAAAATACCACAATACTGCGATGAAAATGGAGCAACCGTGGTGGTAACAGACTATGGTGAAGGAGACAGAACAGACTTCATAATGAGTCCACGAGGCTACGCGAAATTGGGACGCAATGCAGATGCATCTGCAGAGCTATTCAAATATGGTGTAGTTGGTATTGAATTCAAAAGAGTTGCATGTATGTACAGTGGCCAGAACATAGTGGCTCAAGTCCATGAACGCAGCAAAAATCCTGATTACTTTGCTGTTGTGGTTCTCTATGTAGATGGAATGTATGATGTCAATGCTGTTGAGATGTGGCAGGAAGATTGCCAAGAATGGAGACCAATGAGGAGGGCTTATGGAGTAGTGTTTGACTCAGCCAATCCTCCAAGTGGTGAAATAAACTTGAGGTTCCAAGTGAGTGGAAATGCAGGTGTTTATTGGGTGCAGTCCAAGAATGCCATCCCTAGTGATTGGAAGGCTGGAGCTGCATATGACACTATGGTTCAGCTTAATTAG 756 0.4458 MELTFKHQLGLVCIIILLPQLCTSQESFTDSRATYYGSPDCYGTPRGACGFGEYGRTVNDGSVAGVSKLWKNGSGCGACYQVRCKIPQYCDENGATVVVTDYGEGDRTDFIMSPRGYAKLGRNADASAELFKYGVVGIEFKRVACMYSGQNIVAQVHERSKNPDYFAVVVLYVDGMYDVNAVEMWQEDCQEWRPMRRAYGVVFDSANPPSGEINLRFQVSGNAGVYWVQSKNAIPSDWKAGAAYDTMVQLN 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01671 251 CDD DPBB_EXLB_N 29 145 - -
Mepo1g01671 251 SMART dpbb_1 62 140 IPR007112 -
Mepo1g01671 251 PRINTS Expansin/Lol pI family signature 66 84 IPR007118 GO:0005576
Mepo1g01671 251 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Mepo1g01671 251 PRINTS Expansin/Lol pI family signature 192 206 IPR007118 GO:0005576
Mepo1g01671 251 PRINTS Expansin/Lol pI family signature 133 149 IPR007118 GO:0005576
Mepo1g01671 251 PRINTS Expansin/Lol pI family signature 232 246 IPR007118 GO:0005576
Mepo1g01671 251 Gene3D - 145 247 IPR036749 -
Mepo1g01671 251 Pfam Lytic transglycolase 63 123 IPR009009 -
Mepo1g01671 251 SUPERFAMILY PHL pollen allergen 153 245 IPR036749 -
Mepo1g01671 251 PANTHER EXPANSIN-B3 17 249 - -
Mepo1g01671 251 SUPERFAMILY Barwin-like endoglucanases 14 149 IPR036908 -
Mepo1g01671 251 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 164 246 IPR007117 -
Mepo1g01671 251 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 150 IPR007112 -
Mepo1g01671 251 Pfam Expansin C-terminal domain 155 235 IPR007117 -
Mepo1g01671 251 Gene3D - 18 144 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01671 Mepo-Chr1 16483362 16485245 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01671 1 250 Expansin Gene Family AT4G17030 55.777 6.70e-106 305
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01671 - - gmx:100779487 451.055