Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01670 ATGGATCTTAGTTTTAAGCATCAATTTAGCCTTGTTTGTGTTATTCTGTTGTTTCCAGTACTATGTAATTGCAAAGAATATTATACCAAATCCAGAGCTTCCTATTATGGCACCTCTGATGGCTATGGGACTCCAAGTGGAGCTTGTGGTTTTGGAGACTATGGAAAGACGGTCAATGATGGCAGTGTCACAGCTGTTTCTGCAAAATTGTGGAAGAATGGTGGAGGCTGTGGTGCATGCTATCAAGTGAAGTGCAAAATACCACAGTATTGTGATGACAATGGAGCATTGGTGGTGGTAACGGACTATGGCGAGGGAGATAGAACTGACTTCATAATGAGTCCACGTGCCTTCTCAGGATTGGGACGCAACGCAGCTGCATCTAAAAAGCTGAAGAAATATGGAGTATTGGATGTTAAATACAAAAGGGTCTCGTGTACATTTAAAGGCAACAATATAGTATACCAGATCAATGAGCACAGTAAAAACCCAGGTTACTTTGCTATTGTGATCCTCTATGTTGGTGGAACGTATGATGTCAATGCTGTTGAGATGTGGCAGAAAGAACAGCACAAATGGGAGTCCATGCGCAGGTCGTATGGGGCAGTATTTGACTATGCTAACCCACCCAAAGGTGAAATCAAATTGAGGTTTCAAGTGAGTAGCAATGTTGGGATCAATTGGGTGGAGTCAAAGTTCGCAATACCTTCAAGTTGGAAAGCTGGTGCTACTTATTCAACCAAGATTCAGACTTACTAA 759 0.4203 MDLSFKHQFSLVCVILLFPVLCNCKEYYTKSRASYYGTSDGYGTPSGACGFGDYGKTVNDGSVTAVSAKLWKNGGGCGACYQVKCKIPQYCDDNGALVVVTDYGEGDRTDFIMSPRAFSGLGRNAAASKKLKKYGVLDVKYKRVSCTFKGNNIVYQINEHSKNPGYFAIVILYVGGTYDVNAVEMWQKEQHKWESMRRSYGAVFDYANPPKGEIKLRFQVSSNVGINWVESKFAIPSSWKAGATYSTKIQTY 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01670 252 Gene3D - 148 252 IPR036749 -
Mepo1g01670 252 PRINTS Expansin/Lol pI family signature 233 247 IPR007118 GO:0005576
Mepo1g01670 252 PRINTS Expansin/Lol pI family signature 134 150 IPR007118 GO:0005576
Mepo1g01670 252 PRINTS Expansin/Lol pI family signature 27 42 IPR007118 GO:0005576
Mepo1g01670 252 PRINTS Expansin/Lol pI family signature 45 63 IPR007118 GO:0005576
Mepo1g01670 252 PRINTS Expansin/Lol pI family signature 67 85 IPR007118 GO:0005576
Mepo1g01670 252 PRINTS Expansin/Lol pI family signature 193 207 IPR007118 GO:0005576
Mepo1g01670 252 ProSiteProfiles Expansin, family-45 endoglucanase-like domain profile. 46 151 IPR007112 -
Mepo1g01670 252 PANTHER EXPANSIN-B3 16 250 - -
Mepo1g01670 252 Pfam Lytic transglycolase 64 141 IPR009009 -
Mepo1g01670 252 Pfam Expansin C-terminal domain 155 236 IPR007117 -
Mepo1g01670 252 SMART dpbb_1 63 141 IPR007112 -
Mepo1g01670 252 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 165 247 IPR007117 -
Mepo1g01670 252 SUPERFAMILY Barwin-like endoglucanases 14 151 IPR036908 -
Mepo1g01670 252 Gene3D - 25 144 IPR036908 -
Mepo1g01670 252 SUPERFAMILY PHL pollen allergen 152 246 IPR036749 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01670 Mepo-Chr1 16473104 16481963 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01670 5 249 Expansin Gene Family AT4G17030 49.398 3.24e-90 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01670 - - psat:127074244 455.292