Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01654 ATGGCTAACTTTGAAGAAGTTTCAGCTCTAAAACGTATCAAATTCCATCTTCTTGGTGAATTTTCTCCACTTCCATCTCCTATTTCAACACCTTGTTTTGATTTTGATTTTGAATTTCAAACCAACCAAACAACTTCTCAATCAGAATCCAATTCTTCCACTTCAATATCTATGGATCATTATTTCACTAATCTCCTTGAAACAGATACACTGTTCGAATTTGACACAAAACCTCAAATGATGGAAGATGAGAGCCCTAAAGCTCTAAGATCTCATCCTTTTAACCAACCTCAACAAACCGTTGAGAAGAAGCCTAAACTGGCTCGAAAACCCTCGCTAGAAATCGCTCTACCGAAGAAAACCGAATGGATCCAATTCGCTAAACCGGATCCAAAACCGGAGGTGGTTGTCCAGAAGCCTGAAGCAGTTGAGAAAAGGCACTACAGAGGAGTTAGACAAAGACCATGGGGAAAGTTCGCCGCTGAGATCCGTGACCCGAACAAAAGAGGTTCAAGAGTTTGGCTTGGAACTTTTGAAACTGCTATCGAAGCTGCTAAAGCCTACGATTCAGCCGCTTTCAGGATGCGCGGATCTAAAGCGATTCTCAACTTTCCACTTGAAGTCAACGCAGTCGCGGCGGCGAAGACCGCAGTCACAACGGCGGAAACCACCGTGGGCGGCAATAAGAAACGGTGCCGTGAAGAAGAAGAGGAAGAGGTGGTAGAAGTAAAACCGGTGGTGAAAAAGGAGAAAATAACAGAATATGATATGAACTGTTTCAAAGAGATGCCGTTAACGCCGTCTTTTTGGACTGGTTTGTGGGACGGTGATGTCAAGGGGATGTCCAGCGTTTCACCGTTGTCTCCGTTGTCTTCCTTCTGTTTGTCACCTTTAGTTGTTGTGTGA 906 0.4415 MANFEEVSALKRIKFHLLGEFSPLPSPISTPCFDFDFEFQTNQTTSQSESNSSTSISMDHYFTNLLETDTLFEFDTKPQMMEDESPKALRSHPFNQPQQTVEKKPKLARKPSLEIALPKKTEWIQFAKPDPKPEVVVQKPEAVEKRHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFETAIEAAKAYDSAAFRMRGSKAILNFPLEVNAVAAAKTAVTTAETTVGGNKKRCREEEEEEVVEVKPVVKKEKITEYDMNCFKEMPLTPSFWTGLWDGDVKGMSSVSPLSPLSSFCLSPLVVV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01654 301 Gene3D AP2/ERF domain 146 207 IPR036955 GO:0003700|GO:0006355
Mepo1g01654 301 PANTHER DNA-BINDING DOMAIN 63 229 IPR044808 GO:0003700|GO:0009873
Mepo1g01654 301 SMART rav1_2 147 211 IPR001471 GO:0003700|GO:0006355
Mepo1g01654 301 PRINTS Ethylene responsive element binding protein signature 148 159 IPR001471 GO:0003700|GO:0006355
Mepo1g01654 301 PRINTS Ethylene responsive element binding protein signature 187 207 IPR001471 GO:0003700|GO:0006355
Mepo1g01654 301 ProSiteProfiles AP2/ERF domain profile. 147 205 IPR001471 GO:0003700|GO:0006355
Mepo1g01654 301 FunFam Ethylene-responsive transcription factor 2 146 207 - -
Mepo1g01654 301 SUPERFAMILY DNA-binding domain 147 207 IPR016177 GO:0003677
Mepo1g01654 301 CDD AP2 147 205 IPR001471 GO:0003700|GO:0006355
Mepo1g01654 301 Pfam AP2 domain 147 197 IPR001471 GO:0003700|GO:0006355
Mepo1g01654 301 MobiDBLite consensus disorder prediction 81 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01654 Mepo-Chr1 16285696 16286842 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01654 72 301 AP2-EREBP Transcription Factor Family AT5G47230 51.282 2.49e-58 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo1g01654 AP2 3.9e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01654 K09286 - gmx:100816039 296.975