Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01651 ATGCATATAGAGGAATTGAAGGGAGGTGAGGTGGTGGAAGGTGGAGAGGAAGGAAAATGGAGTTTTGTTGGTTCTGATACGAAAAGGGTTTTGGTTGGAGCAGGCGCTCGAGCGCTATTTTATCCCACGCTTGTTTATAATGTTGTTAGGAATAGGCTTCAGGCTGAATTTCGATGGTGGGATAAGATTGATGAGTTCATATTGTTAGGTGCTGTTCCATTTCCTATTGATGTTCCTCGCTTGAAGGATCTTGGTGTTCGTGGGGTCATCACATTGAATGAGCCATATGAGACTTTAGTTCCAACCACATTATATCATGCTCATGGAATTGATCATCTGGTGATTCCTACTAGAGATTACTGTTTTGCTCCACCACTAAACGACATACGCCGTGCTGTTGACTTCATACACAAAAATGCATTGTCTGGACGCACTACATATGTCCACTGCAAAGCTGGACGAGGCCGCAGCACAACTATTGTTATTTGTTATCTGGTGCACCACAAACTGATGTCACCTGATGCTGCATATGAATATGTGAAGTCAATTCGCCCAAGGGTGCTTCTAGCTTCTGCTCAGTGGCAAGCTGTCCAGGAATACTACCGCCACCTAATTTTAAGGAGGGCTGTTGGATTTGCACCCGCAGCTGATCTATTAGTAAAGGCTTCTGAGTTTGCAGCAGCTTCACACGATCTTGTACCTTTTGATGACAATTCTGTAGTTGTGGTAACAGAGCAAGATCTCGAAGGATACGACCAAAGTTGTCAATCAGATACCATGGCAAGAGAAATATGGGCAGATTTAAGCGTTGTTTACCGCGTGCGAGTTGCTGGACAGGCAGCATTGGCTAGAATATCATGCTTTTGGTTGCGATACGGTACCGACGAGAAGATATCTACGGAAAAACTGAGCAGGGAAAGCAGTTGCTCAATCAGAACTAATCACTTGGGAGAAATTAATGTTGATATCCATGTGTACTGA 981 0.4404 MHIEELKGGEVVEGGEEGKWSFVGSDTKRVLVGAGARALFYPTLVYNVVRNRLQAEFRWWDKIDEFILLGAVPFPIDVPRLKDLGVRGVITLNEPYETLVPTTLYHAHGIDHLVIPTRDYCFAPPLNDIRRAVDFIHKNALSGRTTYVHCKAGRGRSTTIVICYLVHHKLMSPDAAYEYVKSIRPRVLLASAQWQAVQEYYRHLILRRAVGFAPAADLLVKASEFAAASHDLVPFDDNSVVVVTEQDLEGYDQSCQSDTMAREIWADLSVVYRVRVAGQAALARISCFWLRYGTDEKISTEKLSRESSCSIRTNHLGEINVDIHVY 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01651 326 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 127 195 IPR000387 GO:0016311|GO:0016791
Mepo1g01651 326 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 51 204 IPR029021 -
Mepo1g01651 326 FunFam Dual specificity phosphatase domain protein 59 207 - -
Mepo1g01651 326 CDD PTPMT1 59 203 IPR044596 GO:0004721
Mepo1g01651 326 ProSitePatterns Tyrosine specific protein phosphatases active site. 148 158 IPR016130 GO:0016311|GO:0016791
Mepo1g01651 326 Gene3D Protein tyrosine phosphatase superfamily 59 209 IPR029021 -
Mepo1g01651 326 ProSiteProfiles Dual specificity protein phosphatase domain profile. 59 206 IPR020422 GO:0006470|GO:0008138
Mepo1g01651 326 Pfam Dual specificity phosphatase, catalytic domain 99 202 IPR000340 GO:0008138|GO:0016311
Mepo1g01651 326 PANTHER PHOSPHATIDYLINOSITOL PHOSPHATASE 1 290 - -
Mepo1g01651 326 SMART dsp_5 62 203 IPR020422 GO:0006470|GO:0008138
Mepo1g01651 326 SMART ptp_7 101 212 IPR003595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01651 Mepo-Chr1 16247665 16252067 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01651 27 326 Protein tyrosine phosphatase (PTP) family AT2G35680 61.093 3.88e-130 373
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01651 - - gmx:100790413 545.814