Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01649 ATGACGATGGTTGAAAAGGAAGACTTGGGTTTGAGTCTGAGCTTGAACTTCTTTCACAATAACTCTTCTTCTCACAAACCATCTTCCATCCAAACTTTCACTTCCTCAGATCGAAACTTGGAAACATGCAGAGGAGAAAGTGGAAAATACCTACGAGGAATCGACGTGAATAGGTTACCATCTACAGCTATTGAATGCCAAGAGGAAGAAGAAGTAGGGGTTTCATCTCCAAACAGCACAGTTTCAAGTGTTAGTGGAAAAAGAAGCTTGAGAGAAGAAGATCATGACGTGGAAAATAGAGGGAATATTAGTGATGAAGAAGACGCTGAAACTGCTAGGAAAAAACTTAGACTCTCTAAAGACCAATCAGCTATTCTTGAAGAAACATTCAAAGAACACAATACCCTTAATCCCAAGCAAAAGTTGGCACTTGCAAAGCAACTTGGTCTTCGTCCAAGACAAGTAGAAGTCTGGTTCCAAAACAGAAGAGCTAGGACAAAGCTAAAGCAAACAGAGGTTGATTGTGAAGTGTTGAAAAGGTGCTGCGAAAATTTAACGGAGGAAAATAGGAGACTACAGAAGGAAGTACAAGAGCTAAGAGCACTGAAACTTTCCCCACAATTTTACATGCAAATGACTCCACCAACTACTCTTACTATGTGCCCTTCTTGTGAACGTGTGGCTGTTCCATCTAATGCTTGTGTTGATGCATCTAACCGTCACCATTCTATGGCCCAAGCCCATCCTCGGGCTGTACCTATAGGCCCATGGGCTTCTGCTACTCCACTCACGAATAGGATGTTTGATGTTTTCCGTCAATGA 822 0.4197 MTMVEKEDLGLSLSLNFFHNNSSSHKPSSIQTFTSSDRNLETCRGESGKYLRGIDVNRLPSTAIECQEEEEVGVSSPNSTVSSVSGKRSLREEDHDVENRGNISDEEDAETARKKLRLSKDQSAILEETFKEHNTLNPKQKLALAKQLGLRPRQVEVWFQNRRARTKLKQTEVDCEVLKRCCENLTEENRRLQKEVQELRALKLSPQFYMQMTPPTTLTMCPSCERVAVPSNACVDASNRHHSMAQAHPRAVPIGPWASATPLTNRMFDVFRQ 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01649 273 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 9 243 - -
Mepo1g01649 273 Gene3D - 117 167 - -
Mepo1g01649 273 Pfam Homeodomain 113 167 IPR001356 GO:0003677
Mepo1g01649 273 SUPERFAMILY Homeodomain-like 106 170 IPR009057 -
Mepo1g01649 273 PRINTS Lambda-repressor HTH signature 140 149 IPR000047 GO:0003677
Mepo1g01649 273 PRINTS Lambda-repressor HTH signature 149 165 IPR000047 GO:0003677
Mepo1g01649 273 FunFam Homeobox-leucine zipper protein HAT22 117 163 - -
Mepo1g01649 273 MobiDBLite consensus disorder prediction 87 114 - -
Mepo1g01649 273 CDD homeodomain 113 170 IPR001356 GO:0003677
Mepo1g01649 273 SMART halz 169 212 IPR003106 GO:0006355|GO:0043565
Mepo1g01649 273 ProSiteProfiles 'Homeobox' domain profile. 109 169 IPR001356 GO:0003677
Mepo1g01649 273 Pfam Homeobox associated leucine zipper 169 203 IPR003106 GO:0006355|GO:0043565
Mepo1g01649 273 ProSitePatterns 'Homeobox' domain signature. 144 167 IPR017970 GO:0000981|GO:0006355
Mepo1g01649 273 Coils Coil 168 205 - -
Mepo1g01649 273 Pfam HD-ZIP protein N terminus 3 92 IPR006712 GO:0005634
Mepo1g01649 273 SMART HOX_1 111 173 IPR001356 GO:0003677
Mepo1g01649 273 MobiDBLite consensus disorder prediction 72 86 - -
Mepo1g01649 273 MobiDBLite consensus disorder prediction 68 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01649 Mepo-Chr1 16230525 16232394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01649 3 272 Homeobox Transcription Factor Family AT4G16780 61.246 2.88e-104 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Mepo1g01649 HD-ZIP_N 4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01649 K09338 - gmx:100813367 375.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00502 5 4363606 4365384 Mepo1g01649 1 16230525 16232394 PCT