Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01642 ATGGACAGGGAAGACTCTGTCCTTATACACAATAGTCTTTGTCTTCAACCAACCACTTCCTTATCTTCCTACATTATTGCCTCAACCTCTTCTAATTCCTCTTCCTCCTTAGAAGAAGAAGAAGAAGAAGAAGAAGCTACTAACACTGAATGCAAAAAAATAAGCAATACCAAAGAAAAGAAAAAGAAGAAAGTGGGAATGGTGAATAAAGTGAATGATAATAGTGATGATGGGAAGAATAATCCAACCTATAGAGGAGTAAGAATGCGTCAATGGGGCAAATGGGTATCAGAAATTAGAGAGCCAAGGAAAAAATCAAGAATTTGGCTAGGAACTTTTCCAACTCCTGATATGGCTGCTAGAGCTCATGATGTGGCTGCTCTTACTATCAAAGGCTCTTCAGCTTACCTCAATTTTCCCGAATTAGCTGCCATGCTGCCACGTCCAGCTAGTGCCTCTCCTAAAGATATTCAAGTGGCGGCTGCCAAAGCAGCCGCAACTGTTTATAACCATACAATTATTACCGATCAGATTGAGTTAGAAGCTGAAGCCGAGCCGAGCCAAGCTGTTTCTTCTTCGAGTCACAATGAAGGATCATTATTGAAGGGTGAGGATGACATGTTTTTGAACCTGCCTGATCTCACACTTGATTTAAGACAAAGTGGTGATGGTGGGTTTTATTATTCCTCATCGGCTTGGCTTGTAAATGGAGCTCAACATATCGACTCGAGTTTTCGGCTTGAAGACCCTATTCTATGGGACTCTTATCAAGTCACATAA 780 0.4115 MDREDSVLIHNSLCLQPTTSLSSYIIASTSSNSSSSLEEEEEEEEATNTECKKISNTKEKKKKKVGMVNKVNDNSDDGKNNPTYRGVRMRQWGKWVSEIREPRKKSRIWLGTFPTPDMAARAHDVAALTIKGSSAYLNFPELAAMLPRPASASPKDIQVAAAKAAATVYNHTIITDQIELEAEAEPSQAVSSSSHNEGSLLKGEDDMFLNLPDLTLDLRQSGDGGFYYSSSAWLVNGAQHIDSSFRLEDPILWDSYQVT 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01642 259 ProSiteProfiles AP2/ERF domain profile. 83 140 IPR001471 GO:0003700|GO:0006355
Mepo1g01642 259 SMART rav1_2 83 146 IPR001471 GO:0003700|GO:0006355
Mepo1g01642 259 PRINTS Ethylene responsive element binding protein signature 84 95 IPR001471 GO:0003700|GO:0006355
Mepo1g01642 259 PRINTS Ethylene responsive element binding protein signature 106 122 IPR001471 GO:0003700|GO:0006355
Mepo1g01642 259 FunFam Ethylene-responsive transcription factor 2 82 141 - -
Mepo1g01642 259 Gene3D AP2/ERF domain 83 141 IPR036955 GO:0003700|GO:0006355
Mepo1g01642 259 Coils Coil 37 57 - -
Mepo1g01642 259 CDD AP2 84 142 IPR001471 GO:0003700|GO:0006355
Mepo1g01642 259 SUPERFAMILY DNA-binding domain 83 141 IPR016177 GO:0003677
Mepo1g01642 259 MobiDBLite consensus disorder prediction 29 85 - -
Mepo1g01642 259 Pfam AP2 domain 82 132 IPR001471 GO:0003700|GO:0006355
Mepo1g01642 259 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 45 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01642 Mepo-Chr1 16132160 16133659 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01642 75 252 AP2-EREBP Transcription Factor Family AT2G44940 47.317 2.62e-54 175
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Mepo1g01642 AP2 1.1e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01642 - - mtr:11413436 389.037
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo5g00498 5 4324007 4324552 Mepo1g01642 1 16132160 16133659 PCT