Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mepo1g01619 ATGCTTAACCAAATGGCTTCTCCCCTGTTACTTCTCCTCCTCATCACACTCTTCATTTCACATTCTTCATCTCAAATGCTACTATTACCTCTAACACACTCACTTTCCAAAACACAATTCAACACAACCCACCACCTCCTTAAATCCACCTCAACTCATTCCTTATCACGTTTCCACCGCCACAAACACCACCACCACAACCAACTCTCTCTCCCACTCTCACCAGGTTCCGACTACACTCTCTCCTTCACCCTCGGTCCCCACTCCCAACCCATAACTCTCTACATGGACACAGGAAGCGACCTTGTTTGGTTCCCATGCACACCTTTCAACTGCATCCTCTGCGAATTCAAACCCAACCTTACCTCTAATCCTTCTCCCCCTACCAACATCTCCCACAGCACCCCGATTTCATGCAACTCCCATGCATGCTCTGTAGCACACAGTTCCACCCCCTCTTCCGACCTCTGCATAATGGCTCATTGCCCTTTAGACTCCATTGAAACCAAAGATTGCGGTTCATTTCACTGTCCACCATTCTACTATGCTTACGGCGATGGAAGCTTAGTAGCTTCTCTCTATCATGATACACTTTCTATTTCTTCTCTCCAACTTACAAACTTCACATTCGGTTGTGCTCATACAACTTTCTCCGAACCTACCGGAGTCGCTGGGTTTGGTCGTGGATTACTTTCTCTCCCAGCTCAGTTAGCTACTCATTCTCCTCAGCTTGGAAACCGTTTTTCTTATTGCTTAGTTTCTCATTCTTTTCGTTCGGTACGAGTTCGAAAACCAAGTCCACTCATATTAGGTCGTTACAATGATGAAAAACAGAGCAATGGTGATGAAGTTGTTGAATTTGTTTATACTTCAATGCTTGAAAATCCAAAACATCCTTATTTTTACTCTGTTGGCTTGAAAGGAATCTCCGTCGGGAAAAAGATGATTCCAGCACCGAAAATTTTACGGAGGGTGAATAAGAAAGGTGACGGTGGTGTAGTTGTTGATTCCGGCACGACGTTTACAATGTTACCAGAGAAATTTCATAACTCGGTGGTGGAGGCGTTTGACCGTCGTGCTGGGAAAGTTAACCAGAGAGCGCCTGAGATTGAACAGAAAACTGGGCTTTCGCCGTGTTATTATTTGGGCACGGCGGCGATAGTGCCAGCGGTGACATTGCGTTTTGTTGGGGTGAATTCGAGTGTGGTGTTGCCCAGGAAGAATTATTTTTACGAGTTTTTGGACGGTGGGGATGGCGTGAGGAGGAAAGAAAGAGTGGGGTGTTTGATGTTGATGAACGGTGGAGATGAAGCTGAAATGAGTGGTGGGCCCGGGGGAGTACTTGGGAATTATCAACAGCAAGGGTTTGAAGTTGAATATGATCTTGAAAAGAAGCGCGTAGGTTTCGCAAGGAGAAAGTGCGCGTCCCTTTGGGATAGACTCAATCGCGACAAAAACTAG 1461 0.46 MLNQMASPLLLLLLITLFISHSSSQMLLLPLTHSLSKTQFNTTHHLLKSTSTHSLSRFHRHKHHHHNQLSLPLSPGSDYTLSFTLGPHSQPITLYMDTGSDLVWFPCTPFNCILCEFKPNLTSNPSPPTNISHSTPISCNSHACSVAHSSTPSSDLCIMAHCPLDSIETKDCGSFHCPPFYYAYGDGSLVASLYHDTLSISSLQLTNFTFGCAHTTFSEPTGVAGFGRGLLSLPAQLATHSPQLGNRFSYCLVSHSFRSVRVRKPSPLILGRYNDEKQSNGDEVVEFVYTSMLENPKHPYFYSVGLKGISVGKKMIPAPKILRRVNKKGDGGVVVDSGTTFTMLPEKFHNSVVEAFDRRAGKVNQRAPEIEQKTGLSPCYYLGTAAIVPAVTLRFVGVNSSVVLPRKNYFYEFLDGGDGVRRKERVGCLMLMNGGDEAEMSGGPGGVLGNYQQQGFEVEYDLEKKRVGFARRKCASLWDRLNRDKN 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mepo1g01619 486 SUPERFAMILY Acid proteases 74 479 IPR021109 -
Mepo1g01619 486 CDD pepsin_A_like_plant 79 474 IPR034161 -
Mepo1g01619 486 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 333 344 IPR001969 GO:0004190|GO:0006508
Mepo1g01619 486 Gene3D Acid Proteases 276 478 IPR021109 -
Mepo1g01619 486 ProSiteProfiles Peptidase family A1 domain profile. 79 470 IPR033121 -
Mepo1g01619 486 Pfam Xylanase inhibitor C-terminal 302 470 IPR032799 -
Mepo1g01619 486 FunFam Probable aspartyl protease At4g16563 69 270 - -
Mepo1g01619 486 PANTHER OS07G0603500 PROTEIN-RELATED 33 474 - -
Mepo1g01619 486 Gene3D Acid Proteases 65 271 IPR021109 -
Mepo1g01619 486 Pfam Xylanase inhibitor N-terminal 79 258 IPR032861 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mepo1g01619 Mepo-Chr1 15935272 15937390 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mepo1g01619 79 477 Miscellaneous Gene Families AT1G77480 24.083 5.84e-06 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mepo1g01619 - - gmx:100805699 678.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mepo1g01619 1 15935272 15937390 Mepo1g01619 1 15935272 15937390 ECH
Mepo1g01619 1 15935272 15937390 Mepo3g06951 3 83148062 83150740 ECH
Mepo5g00475 5 4127357 4129117 Mepo1g01619 1 15935272 15937390 PCT